Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01147 ATGGAACCAGCTTCAGCTCATTCTTCATCTCAACCTACTCCTCCAGTTTCTAATGCTGAAGAGCAACACTCAACCAAAGTGACTGAACAGATTAACAATGCACATGATTCACCATCATCGTTACCTGCTTCTGGCATGTCATCATGGGCAAGAAATCTGAAATTCCCAGGCCTTGGCCTTGGACAAGCACCACAGGATTCACAGACCGAAAACACAGGCATATCAGCTTTTGCTCGCCTGACTAGTGGGCTTGGATTGCGAACGCAGTCAAAAGAAACTGCTGCTCCACTCAATTCAGGACCTGAGCAATCTAATTTGATTGAATCCTTCACCAAAGGGTTGGTGGACTCTTCCAAGAGTGCAGTAAAAGCTGTCCAGGTCAAAGCACGCCATATTGTCTCACAAAATAAACGTAGATACCAGGAAGATGGATTTGATTTGGATATGACATACATTACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGTTCTATCGCAATCACATGGAAGAAGTGATCAAGTTTTTTGAAACACATCATAAGGGTAAATACAAAGTATACAATCTTTGTTCAGAAAGGTTATATGATGGATCATTATTCCAGGGGAAGGTTGCAACTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTCTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATTCAAAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGGACTGGACTGATGATATGTTGTCTTCTTTTGTTTCTAAAGTTCTTCCCAACTGCCGAAGAAGCCATTGATTACTTTAACCATAAAAGATGTGTAGATGGAAAGGCTCTAGTCCTCCCTAGTCAAATAAGATATGTAAAATACTTTGAACGGACTTTAACACAATTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATACTAAGAGGGTTCCGGCTTCACAAGTGCCCTTATTGGGTTAGACCATCTATTACAATTTCTGATCATAAGGGAGTTCTGTTTGCCACAAAAAACCATCCCAAAACAAAAGATCTGTTGCCAGAAGATTTCTGGATCAGTGCACCGAAGAAAGGAATTGTGGTTTTTGCACTACCAGGAGAACCTGGTCTGGCGGAGTTGGTAGGAGACTTCAAAATTAATTTTAATGATAGACACGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAATCGAAAAATTTTAGATGGTTCAGATTTTGATGGTTTCGACAAGAGGAAGATCCCCGCTCCAGGATTCCGGGTGGAAGTTGTCATGATAGACTATAATGGCACCCTACCTGCAAGGACAAAAGCCAATCCCGCCGGCAAAGGATCTGACGGAAACACAACCAATGCCCTACCTGGTCCAAAGCCTACTACTTCTAATTCAACTGAGAGTAAACTCCCAAGAAATGGAGATGATGATGTATTCTCAGACAGTGATGAAGAGGAGAGCCGAGATACACAAAGCAAGAAAGCTGCAACTGAGTACAAATTTATGGCCCCTCATCAAGTATCTGAGGGGACAATAGACCATGTAGGGATGTTGACACACACAACGGATCGGTTGTCACTACAGCATGAGGCACGCAGGGAAGACAATTATTCTGAAGAATCAACCCAAGATAAACATCATAAAATTCATACAGGCAATAGCAGCACAAACGTGGGATCTGTAGGGGGAAGTGACATCAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCCTTTGGGGATGAAGACTTTGAAAGTGATTGA 1824 0.4189 MEPASAHSSSQPTPPVSNAEEQHSTKVTEQINNAHDSPSSLPASGMSSWARNLKFPGLGLGQAPQDSQTENTGISAFARLTSGLGLRTQSKETAAPLNSGPEQSNLIESFTKGLVDSSKSAVKAVQVKARHIVSQNKRRYQEDGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVATFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICCLLLFLKFFPTAEEAIDYFNHKRCVDGKALVLPSQIRYVKYFERTLTQFNGEVQPGRRCILRGFRLHKCPYWVRPSITISDHKGVLFATKNHPKTKDLLPEDFWISAPKKGIVVFALPGEPGLAELVGDFKINFNDRHGDFYCWMNTTMTENRKILDGSDFDGFDKRKIPAPGFRVEVVMIDYNGTLPARTKANPAGKGSDGNTTNALPGPKPTTSNSTESKLPRNGDDDVFSDSDEEESRDTQSKKAATEYKFMAPHQVSEGTIDHVGMLTHTTDRLSLQHEARREDNYSEESTQDKHHKIHTGNSSTNVGSVGGSDIKAIAADASVFSFGDEDFESD 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01147 607 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 123 320 - -
Phco4g01147 607 MobiDBLite consensus disorder prediction 551 584 - -
Phco4g01147 607 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
Phco4g01147 607 MobiDBLite consensus disorder prediction 1 47 - -
Phco4g01147 607 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 291 IPR000387 GO:0016311|GO:0016791
Phco4g01147 607 MobiDBLite consensus disorder prediction 465 490 - -
Phco4g01147 607 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 316 IPR029021 -
Phco4g01147 607 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 568 - -
Phco4g01147 607 Gene3D Protein tyrosine phosphatase superfamily 123 320 IPR029021 -
Phco4g01147 607 MobiDBLite consensus disorder prediction 551 572 - -
Phco4g01147 607 CDD PTP_PTEN 148 312 IPR045101 GO:0016791
Phco4g01147 607 MobiDBLite consensus disorder prediction 457 515 - -
Phco4g01147 607 ProSiteProfiles C2 tensin-type domain profile. 324 451 IPR014020 -
Phco4g01147 607 MobiDBLite consensus disorder prediction 1 48 - -
Phco4g01147 607 SMART PTEN_C2_2 322 450 IPR014020 -
Phco4g01147 607 ProSiteProfiles Phosphatase tensin-type domain profile. 138 317 IPR029023 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01147 Phco-Chr4 9433260 9442380 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01147 4 9433260 9442380 Phco4g01147 4 9433260 9442380 ECH
Phco4g01147 4 9433260 9442380 Phco6g02828 6 49500601 49507470 PCT