Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02793 ATGTTGGGTAGTTGCATTGTCGGGTGGGTTCCTAAGAAAAACAGCGTCAGTGTGGGCCTGCAAACGCTGAGAGTAGAGATAACAACTATGAGGCACAGTTATGAGCTTCTTCTGCACCGACCTCTTCTCTACTTTGTCTTCTCTTGCTCACTATGTTGTGCAGTGCAAGAGGGAGAAGGGGTTATGGTGCGCAACACCCCACAAAGTAGCTGGTGGAAGCCAAGTTCAACCAATGCAGGGGATGATGAGTCTCCTCCAAGGCCCTTGAAGGTTACTTTCACAGGGCCTGCAACGCACTGGACAGATGCCATCCCCATTGGCAATGGCCGTCTCGGTGCCATGGTTTGGGGTGGCGTACCCTCCGAACTTCTCCAGCTCAATGAGGACACACTTTGGACTGGGATCCCTGGAGACTACACCAACAAAAGTGCTCCACAAGCACTGGCTGAAGTCAGAAAGCTTGTTGATGATAGAAAATTCCCTGAAGCTACAGCAGCAGCTGTCAAGTTGTCAGGAGAGCCTTCCAATGTATACCAACTCCTCGGTGATATCAAGATAGAGTTTCATGATTCTCATGTTAAATATTCGAAGGAGTCATATCACAGGGAGCTGGATTTGGACACTGCAACGGCTAAAATAAAATATTCTGTGGGTAATGTAGAATTTACGAGAGAACATTTTGTTTCTAATCCAGACCAAGTAATAGTGACAAGGTTGTCTGCAAGCAAACCCGGGTCATTATCATTTACGGTGTATTTTGATAGCAAAATGCATCACGATTCAAGGGTAAGTGGCCAAAATCAGATAATAATCGAAGGGAGATGTCCTGGTAGTAGGATTCAACCAAGAGTGAATTCAATTGACAATCCAAAGGGAATTCAGTTTTCTGCAGTTTTTGATATGCAGATTGGTAACGGGGTTATACAAGTTTTGGATGATAGGAAGCTAAGAATTGAAGGTTCAGATTGGGCTGTTTTGCTTTTGACAGCTTCTTCTTCCTTTGATGGCCCATTTACTATGCCTGAAGACTCTAAGAAGGACCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCTGTGAAAAAATTTTCATATGCTGATCTTTATGCACGACACTTGGATGACTATCAAAATCTATTTCATCGCGTCTCATTGCAACTCTCTAAAAGCTCCAAGAATATTTTAGGAAAATCTGTTTTTTACAAAAGGCAATCGGTTTCCTCCCAAACAATCTCTCAAAAGGAAAGTGACACAATTCCAACTTCAGCAAGAGTCAAATCTTTTCAAATTGACGAGGATCCTTCCTTTGTTGAACTTTTGTTTCAATATGGTCGATATCTGCTAATCTCTTGTTCACGTCCTGGGACTCAGGTGGCAAACCTACAGGGTATCTGGAACAAAGATGTTGAGCCTGCATGGGATGGGGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCAGCCCTTTCTAGCAACCTACATGAGTGTCAAGAGCCCTTATTTGATTTCATTTCGTCTTTGTCTGCCAATGGTAAAAAAACTGCAAAGGTGAACTATGAAACAAATGGTTGGGTTGCACATCAAGTTTCTGACATATGGGGTAAAACATCACCAGATAGAGGTGAGGCTGTTTGGGCTTTATGGCCTATGGGTGGAGCTTGGCTTTCTGTCCATTTATGGGAGCATTATACTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCATACCCTTTGTTGGAAGACTGTACATCATTTTTGTTGGATTGGTTGATTGAAGGCCGTGGTGGATTTTTACAAACTAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGACGGAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTATAATCATTGCTGCTGCTGAGGTTTTGGGAAGACATGATGATGCAATCATCAAAAGAGTCACTGAGTATCAGTCTAAGCTTCCTCCGACAAAAGTTTCTAAAGATGGTACGATTATGGAATGGGCAGAGGATTTTCAGGACCCAGATGTACATCATCGACATGTTTCACATCTGTTTGGACTATTTCCAGGGCACACCATTAGTCTTGATAAAACTCCAGGCCTCTGTAAAGCCGTGGAATTTAGTCTAATTAAAAGAGGAGATGATGGTCCAGGATGGTCGACAACTTGGAAAGCTTCATTGTGGGCACATCTTCAGAATAGTGAGCATGCATATCGTATGATAAAACACTTGATTGTCTTGGTAGACCCTGACCATGAAAGTGATTACGAAGGAGGACTTTATAGCAATCTGTTCACAGCACATCCCCCTTTTCAGATTGATGCTAACTTTGGTTTTTCAGGAGCAATAGCAGAAATGCTTGTTCAAAGCACTATGAAGGACCTCTACTTGCTTCCGGCATTGCCACGCGATAAATGGGCCAATGGTTGTGTGAAAGGATTGAAAGCTCGTGGTGGGGTGACAGTCAACATTTGCTGGAAAGAAGGAGATCTCAGTGAAGCTGGGCTTTGGTCAGAAGGGCAGAAATCCCAAGTAAGACTACATTATAGAGGAACCGTGGTGTTAACAAGTTTGTCACCTGGCAGAGTTTATTCATATAATAACCTATTGAAGTGTGTGAACACATACTCCCTCACTAAAGTTAATCCTTGA 2688 0.4256 MLGSCIVGWVPKKNSVSVGLQTLRVEITTMRHSYELLLHRPLLYFVFSCSLCCAVQEGEGVMVRNTPQSSWWKPSSTNAGDDESPPRPLKVTFTGPATHWTDAIPIGNGRLGAMVWGGVPSELLQLNEDTLWTGIPGDYTNKSAPQALAEVRKLVDDRKFPEATAAAVKLSGEPSNVYQLLGDIKIEFHDSHVKYSKESYHRELDLDTATAKIKYSVGNVEFTREHFVSNPDQVIVTRLSASKPGSLSFTVYFDSKMHHDSRVSGQNQIIIEGRCPGSRIQPRVNSIDNPKGIQFSAVFDMQIGNGVIQVLDDRKLRIEGSDWAVLLLTASSSFDGPFTMPEDSKKDPTSESLSKMKSVKKFSYADLYARHLDDYQNLFHRVSLQLSKSSKNILGKSVFYKRQSVSSQTISQKESDTIPTSARVKSFQIDEDPSFVELLFQYGRYLLISCSRPGTQVANLQGIWNKDVEPAWDGAPHLNINLQMNYWPALSSNLHECQEPLFDFISSLSANGKKTAKVNYETNGWVAHQVSDIWGKTSPDRGEAVWALWPMGGAWLSVHLWEHYTYTMDKDFLKNKAYPLLEDCTSFLLDWLIEGRGGFLQTNPSTSPEHMFTAPDGKPASVSYSSTMDISIIKEVFSIIIAAAEVLGRHDDAIIKRVTEYQSKLPPTKVSKDGTIMEWAEDFQDPDVHHRHVSHLFGLFPGHTISLDKTPGLCKAVEFSLIKRGDDGPGWSTTWKASLWAHLQNSEHAYRMIKHLIVLVDPDHESDYEGGLYSNLFTAHPPFQIDANFGFSGAIAEMLVQSTMKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLSEAGLWSEGQKSQVRLHYRGTVVLTSLSPGRVYSYNNLLKCVNTYSLTKVNP 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02793 895 PANTHER ALPHA-L-FUCOSIDASE 2 73 887 - -
Phco6g02793 895 PIRSF UCP007663 62 893 IPR016518 GO:0004560
Phco6g02793 895 FunFam Alpha-L-fucosidase 2 321 799 - -
Phco6g02793 895 MobiDBLite consensus disorder prediction 66 82 - -
Phco6g02793 895 MobiDBLite consensus disorder prediction 66 87 - -
Phco6g02793 895 Pfam Glycosyl hydrolase family 65, N-terminal domain 92 336 IPR027414 -
Phco6g02793 895 SUPERFAMILY Six-hairpin glycosidases 346 845 IPR008928 GO:0005975
Phco6g02793 895 Gene3D - 325 799 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02793 Phco-Chr6 49217285 49224250 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02793 6 49217285 49224250 Phco6g02793 6 49217285 49224250 ECH
Phco4g00023 4 181206 186928 Phco6g02793 6 49217285 49224250 PCT