Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00023 ATGGAAGCTTCGGACTTGAAGATTAGGTTCGGAGAAGAAGGTGGGAAGCACTGGACTGATGCCCTTCCCATTGGCAATGGACGCCTCGGAGCCATGATCTGCGGCCGCCTCCATTCCGAAACCATCCACCTCAACGAGGACACGCTCTGGACTGGTACACCCGCGGACTACACTAATTCAAAAGCTCCACAAGCCCTTTCTCGGGTTAGAAACCTCGTTAACCGTCAACAATATCCACAAGCCACTGCTGCTGCTTCTGCCTTAACAGGATCAAATCCATCCGAGGCCTACCAACTTCTCGCCGATATAAAATTGGACTTCGATTATTCACATCTCACCGGCGTCCAACAAACTTACCAGAGGGAGCTGGACTTGGATACTGCTACTGTCAAAGTCAACTATTCCGTTGGAGATGTTCAGTTCAAAAGGGAACATTTTGCCTCCTATCCAGATCAAGTCATTGTCACCAACATTTCCGCCACTCAAAATGCCAGACTTTCATTCACACTTTCTCTACAGAGCAAAATGATTAATCAAACCTACTTAAACGGAACCAATCAGATTATAATGAAGGGATCGTGTCCTGGTAAAAGGGTCTCTCCTCAACTCCAGCACAGCGCACAAGATACTCCGCAGGGAATTCAATTCTCTGCAATTCTTGATTTGAAAATTGGTGGTACAAATGGCGTCATCAGTGTTTTGGACGACAACAAGTTGAAGGTTGAGGCTTCAGATTGGGCTGTTTTACTTCTCGTTGCTTCGTCCTCCTTCAGTGGCCCATTCACACCACCTTCAGATTCTAAAAAGGATCCTACTTCTGAGTGTTTCAGTATATTGAGCTCAATAAGCAATGTGTCATATTCTGACCTCTATGCACGCCATTTAAATGACTATCAAGATCTTTTTCACCGGGTATCGCTGAAGCTTATGAGAAGCACCCAGCTGAATATTCCAGAAGACAGCTCTTTGGAATTGAAGACGCTTGCGCCAACGGTAGCTAATCTGTCTCTAGTGGACAGTGTAACACAAGTTTCAACCTCTGACAGGGTGAAATCATTTCAGACTGATGAAGATCCATCCTTGGTGGAGCTTCTATTTCAATATGGTCGATATTTGCTTATTTCTTCTTCGCGCCCTGGAACTCAGGTGGCAAACCTACAGGGAATTTGGAACAAAGATCTCGAGCCTATTTGGGATGGAGCTCCCCACTTGAACATCAATCTTGAAATGAACTATTGGCCTGCTCTTCCTTGCAATCTTAGCGAGTGTCAAGAACCCTTGTTTGATTATCTTTCCTCTCTGTCAGTGAATGGCAGTAAAACTGCATATGTGAATTACCAAGCAAGTGGGTGGGTGGCACATAGTAAATCAGATATATGGGCAAGAACATCAGCAGGTCATGGTGATGTTCTGTGGGCCTTATGGCCAATGGGTGGAGCATGGCTTTGTACCCATCTATGGGAGCACTATGCCTACACGATGGATAAGGATTTCCTTGAATATAAAGCATATCCCATAATGGAAGGATGTGTCGCATTTCTGTTGAGTTGGCTGATAGAAGACAATGAAGGATATCTAGAAACTAATCCATCAACTTCCCCTGAACATAATTTTATTGCTCCAGACGGTGAGCCTGCATGTGTAAGTCAGTCATCCACAATGGATGTGGCAATCGTACATGAAGTCTTCTCCACATTTCTTTCTGCTGCTGAGGTTATAGGGAGAACAAAGGATAATATTGTCAGAAAAGTTAGTGAAGCTCAACCACGGTTACGTCCACTCTATATTGCCCAAGATGGTTCCCTTATGGAATGGGTGAAAGATTTCAAGGATCCAGAGGAACATCACCGGCACCTCTCACATCTATTCGGTCTATTTCCGGGTCATACAATCACTCTTGAGCAAACTCCAGCCCTGTTTGAAGCTGCTGAGAAAAGCCTTTATAAACGAGGAGAGGAAGGTCCTGGGTGGTCAACCACATGGAAAACTGCTTGCTGGGCACGTCTACAGAACAGTTCGAATGCATATAAGATGATCAAGCGCTTGATAAACTTGGTGGATCCGGATCATGAGATACCATTTCAAGGTGGACTTTACAGCAACCTGTTTGCAGCACACCCTCCATTTCAGATCGATGCCAATTTCGGTTTTGCAGCGGCGGTTGCAGAAATGCTTGTGCAGAGTACATTGAGCGATCTTTTCTTACTTCCTGCTCTTCCCTGGGAGAAATGGCCAAATGGCTCCTTGAAAGGCTTGAAGGCTCGTGGAGGAACAACAGTTAACATATGCTGGAGAGAAGGGGATCTTCAGGAGTTTGGTATATGGTCCAAGGAACATACAAGAACAACTCTGACAAAAAGAATACACTACAAAGGAACCATGGTCACCGCAGACCTAATGACTGGCGTTTTTTACAAGTTCAACGGACAGTTGAAGTGTTTGAACTCATGCTCTCTTTCAGAAATGGCGTGTTCTTGA 2478 0.45 MEASDLKIRFGEEGGKHWTDALPIGNGRLGAMICGRLHSETIHLNEDTLWTGTPADYTNSKAPQALSRVRNLVNRQQYPQATAAASALTGSNPSEAYQLLADIKLDFDYSHLTGVQQTYQRELDLDTATVKVNYSVGDVQFKREHFASYPDQVIVTNISATQNARLSFTLSLQSKMINQTYLNGTNQIIMKGSCPGKRVSPQLQHSAQDTPQGIQFSAILDLKIGGTNGVISVLDDNKLKVEASDWAVLLLVASSSFSGPFTPPSDSKKDPTSECFSILSSISNVSYSDLYARHLNDYQDLFHRVSLKLMRSTQLNIPEDSSLELKTLAPTVANLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPIWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVAFLLSWLIEDNEGYLETNPSTSPEHNFIAPDGEPACVSQSSTMDVAIVHEVFSTFLSAAEVIGRTKDNIVRKVSEAQPRLRPLYIAQDGSLMEWVKDFKDPEEHHRHLSHLFGLFPGHTITLEQTPALFEAAEKSLYKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMLVQSTLSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICWREGDLQEFGIWSKEHTRTTLTKRIHYKGTMVTADLMTGVFYKFNGQLKCLNSCSLSEMACS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00023 825 PIRSF UCP007663 2 811 IPR016518 GO:0004560
Phco4g00023 825 SUPERFAMILY Six-hairpin glycosidases 269 772 IPR008928 GO:0005975
Phco4g00023 825 Gene3D - 249 725 IPR012341 GO:0005975
Phco4g00023 825 FunFam Alpha-L-fucosidase 2 244 725 - -
Phco4g00023 825 Pfam Glycosyl hydrolase family 65, N-terminal domain 15 258 IPR027414 -
Phco4g00023 825 PANTHER ALPHA-L-FUCOSIDASE 2 3 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00023 Phco-Chr4 181206 186928 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00023 4 181206 186928 Phco4g00023 4 181206 186928 ECH
Phco4g00023 4 181206 186928 Phco6g02793 6 49217285 49224250 PCT