Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02751 ATGAAGCTTCCGAGATCTTTGTTCTGCGTCTTTTTAGGGTTTTTGGTACTGTTTCTTTCGCCGCCGTCAATGGCGAAATTCGTGGTGGAGAAAAACAGCTTGACGGTGACGTCGCCGGACAACATCAAGGGCACGCACGATAGCGCGATTGGGAACTTTGGGATACCTCAATACGGAGGCAGCATGGCTGGGAACGTGGTGTACCCTAAGGACAACCAAAAGGGTTGCAAGGAGTTCCATGAGTATGAGATTTCCTTCAAATCTAAACCTGGTGCTCTTCCCACTGTCGTTTTGGTCGATCGAGGAAATTGCTTCTTTGCTTTGAAGGTCTGGAATGCACAAAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGACATCGAGGAAAAGTTGATAACCATGGACACTCCTGAAGAGGATGTGTCTTCTGCAAAATACATAGAGAACATAACAATACCATCTGCTCTGATAGAAAAAAGTTTTGGTGGAAAGTTAAAGGATGCCATAAGTAATGGGGATATGGTCAATGTAAATCTGGATTGGAGAGAGGCAGTCCCCCACCCAGATGATCGTGTGGAATATGAACTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAAGATTTTAAGGGTGCAGCGCAGATATTGGAGAAAGGTGGTTATACTCAATTTACGCCCCATTATATAACTTGGTACTGTCCCCAAGCATTCACATTGAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGGAGATATTGTGCTCCAGATCCTGAGCAGGATTTCAGTACTGGATATGATGGAAAGGACGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGATTATGTCACTGATTTTCAAATTAGATGTCCAATGAAGGAGAAAAAATACAACAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGTCTTGATATTAAAAAGATTGAAAGGTGCATGGGAGATCCAAATAATGATTCTGAAAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTTGGAAAGGGATCACGAGGTGATGTTACCATATTGCCTACTCTAGTTGTCAACAATAGACAGTATCGAGGAAAATTAGAGAAAGGTGCTGTTATGAAAGCTATTTGTGCTGGTTTTGAAGAAACTACGGAACCTGCTGTTTGTTTGAGCAGTGATGTGGAGACAAATGAGTGCTTGGAGAATAATGGTGGTTGTTGGCAGGATAAACCAGCTAATATCACCGCTTGCAAGGATACTTTCCGTGGGAGAGTATGTGAATGCCCCTTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACATGTGCAGCTAGTGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCTCGGAATGGACATGCATATTCTGCTTGTTTGGATGATGGAGGGGTTAAATGTAAGTGTCCTGCGGGCTTTAAAGGGGATGGTGTAAAAAATTGTGAAGACATTGATGAATGCAGAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATGACTGCACTTGCAGTGGAGATCTTTTGTATATAAGAGACCACGATACTTGCATAAGTAAAACTGCGAGTCAGGAGGGAAGATCAGCTTGGGCTGCTTTTTGGGTTATTTTAGTTGGCTTAGTTGTGGCTGCTGGTGGGGCATACCTCGTGTACAAATATAGAATAAGGTCGTATATGGATTCCGAGATCAGAGCCATCATGGCACAGTATATGCCCTTGGACAGCCAATCAGAGGTTGTAAATCATGCGAACGATGAAAGAGCGTGA 1893 0.4353 MKLPRSLFCVFLGFLVLFLSPPSMAKFVVEKNSLTVTSPDNIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFHEYEISFKSKPGALPTVVLVDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDVSSAKYIENITIPSALIEKSFGGKLKDAISNGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIERCMGDPNNDSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICAGFEETTEPAVCLSSDVETNECLENNGGCWQDKPANITACKDTFRGRVCECPLVDGVQFKGDGYTTCAASGPGRCKINNGGCWHEARNGHAYSACLDDGGVKCKCPAGFKGDGVKNCEDIDECREKKACQCPECSCKNTWGSYDCTCSGDLLYIRDHDTCISKTASQEGRSAWAAFWVILVGLVVAAGGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHANDERA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02751 630 CDD EGF_CA 518 546 - -
Phco6g02751 630 ProSitePatterns EGF-like domain signature 2. 502 516 IPR000742 -
Phco6g02751 630 SMART egfca_6 518 560 IPR001881 GO:0005509
Phco6g02751 630 SUPERFAMILY PA domain 32 141 IPR046450 -
Phco6g02751 630 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Phco6g02751 630 FunFam vacuolar-sorting receptor 1 411 467 - -
Phco6g02751 630 CDD PA_VSR 52 179 - -
Phco6g02751 630 Gene3D Laminin 411 467 - -
Phco6g02751 630 FunFam Vacuolar-sorting receptor 1 24 188 - -
Phco6g02751 630 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Phco6g02751 630 Gene3D Laminin 472 552 - -
Phco6g02751 630 Gene3D - 24 188 - -
Phco6g02751 630 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 3 619 - -
Phco6g02751 630 Pfam PA domain 63 162 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02751 Phco-Chr6 48940506 48945945 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02751 6 48940506 48945945 Phco6g02751 6 48940506 48945945 ECH
Phco4g00032 4 223961 227794 Phco6g02751 6 48940506 48945945 PCT