Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02537 ATGGACCACGTTACCTCCTCAGAGCCTGCTCACAAGATGCCTTGGCTCGTAGCCAATTCTTTGAAGGTTTATTATTGCTACTCCACTTGTGCAGGTAAATCAAGCGATCTCAAAAATGAAGACTGTAAGGGAAAGGATGGACCCGTTGTTTGCTTTGGTGAAATGTTAATAGATTTTGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCCGCTTTCAAGAAAGCTGCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGCATCTCTAGGCTTGGAGGTTCATCTGCTTTTATAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGAAGAACAATGTTGAAACATCTGGCATAAAGTTTGACCCTAATGCAAGAACTGCTTTAGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTTCAAGAGTCAGAGCTTGATACCGATCTCATAAAGAAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCATCTTGCTGCTATGAAAATTGCTAAAGACTCTGGCTGCATTCTCTCATATGATCCAAATTTGAGACTGGCACTATGGCCCTCTGCTGAGGCTGCTCGGAATGGCATAAAGAGTATATGGGATCAAGCCGATGTCATAAAGATAAGTGAGGACGAGATTTCATTTTTGACTGGTGGTGATGATCCTTATGATGATAATGTTGTATTAGAGAAGCTTTTTCACCCTAATCTCAAGCTTTTAATCGTTACTGAAGGGTCAGAAGGTTGTAGATATTACGCCAAGAAATTTAAGGGCAGGGTTGCAGGTGTCAAAGTTAAAGCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGCATTATCTATAGCTTAGCTTCTGACCAAAGTCTTTTCCAGAATGAGGAACGTCTCCGAAAAGCTCTGTATTTTGCGAATGTATGTGGTGCCATCACGGTAACAGAGAGAGGGGCAATTCCTGCACTACCCACAAAAGAAGCTGTCCTGCAATTCGCTGCAACATAA 1098 0.4281 MDHVTSSEPAHKMPWLVANSLKVYYCYSTCAGKSSDLKNEDCKGKDGPVVCFGEMLIDFVPTVGGVSLAEAPAFKKAAGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKKNNVETSGIKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDTDLIKKAKIFHYGSISLIDEPCKSAHLAAMKIAKDSGCILSYDPNLRLALWPSAEAARNGIKSIWDQADVIKISEDEISFLTGGDDPYDDNVVLEKLFHPNLKLLIVTEGSEGCRYYAKKFKGRVAGVKVKAVDTTGAGDAFVSGIIYSLASDQSLFQNEERLRKALYFANVCGAITVTERGAIPALPTKEAVLQFAAT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02537 365 Gene3D - 45 365 IPR029056 -
Phco6g02537 365 PANTHER HEXOKINASE FAMILY MEMBER 49 362 - -
Phco6g02537 365 CDD bac_FRK 49 350 - -
Phco6g02537 365 PRINTS Ribokinase signature 74 93 IPR002139 GO:0016301
Phco6g02537 365 PRINTS Ribokinase signature 271 282 IPR002139 GO:0016301
Phco6g02537 365 PRINTS Ribokinase signature 229 244 IPR002139 GO:0016301
Phco6g02537 365 SUPERFAMILY Ribokinase-like 48 362 IPR029056 -
Phco6g02537 365 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 300 313 IPR002173 GO:0016301
Phco6g02537 365 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 79 103 IPR002173 GO:0016301
Phco6g02537 365 Pfam pfkB family carbohydrate kinase 49 355 IPR011611 -
Phco6g02537 365 FunFam Probable fructokinase-2 46 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02537 Phco-Chr6 46909139 46912342 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00602 5 5850892 5854216 Phco6g02537 6 46909139 46912342 ECH
Phco6g02537 6 46909139 46912342 Phco6g02537 6 46909139 46912342 ECH
Phco5g00602 5 5850892 5854216 Phco6g02537 6 46909139 46912342 PCT