Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00602 ATGGCTCACCCTACCTCATCAGATCAATCCAATGATCTCAGAAAAGAAGACTGCAAGGAAAGAGATTCTCTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCGACGGTGGGAGGAGTATCACTGGCTGAAGCACCTGCGTTCAAGAAATCTCCCGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATCTCTAAACTGGGAGGTTCATCTGCTTTTATTGGCAAGGTTGGAGCAGATGAATTTGGGTACATGCTGGCAGACATTTTAAAGCAAAACAATGTTGAGACTTCTGGCATGCGGTTTGAGTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCGGATGGTGAACGTGAATTTTTGTTTTTCCGCAATCCAAGTGCTGATATGCTCCTTCAAGAATCAGAACTTGATAAAAATCTCCTAAAGCAGGCTAGAATATTTCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTTCTGCTATGAGAATTGCCAAAAGCTCTGGTTGCATTCTCTCTTATGATCCAAATTTGAGATTGGCTCTGTGGCCTTCAGCAGATACTGCTCGGAAAAGCATAATGGATATATGGGATCAGGCTGATGTCATAAAGATAAGTGAGGATGAAATCACATTTTTGACAGGAGGTGATAATCCTTATGACGATAATGTTGTTTTGAAGAAACTTTTTCATCCAAATCTCAAGCTTTTAATCGTTACTGAAGGGTCACAAGGTTGCAGATACTACACCAAAGCATTTAAGGGCAGGATTGCAGGTGTTAAAGTTAAACCTGTAGACACAACTGGTGCTGGCGATGCATTTGTTAGTGGGATTTTATACAGTATAGCTTCTGATCAAACTATTTTTCAGGATGAGAAACGTCTTAGAAAGGCTTTATATTTTGCCAATATATGTGGTGCCCTCACTGTGACTGAGAGAGGTGCAATTCCTGCACTTCCCACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATATAA 1038 0.4114 MAHPTSSDQSNDLRKEDCKERDSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKSPGGAPANVAVGISKLGGSSAFIGKVGADEFGYMLADILKQNNVETSGMRFESNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKNLLKQARIFHYGSISLIDEPCKSAHLSAMRIAKSSGCILSYDPNLRLALWPSADTARKSIMDIWDQADVIKISEDEITFLTGGDNPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRIAGVKVKPVDTTGAGDAFVSGILYSIASDQTIFQDEKRLRKALYFANICGALTVTERGAIPALPTKEAILQFLLEAAVI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00602 345 PANTHER HEXOKINASE FAMILY MEMBER 24 338 - -
Phco5g00602 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Phco5g00602 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Phco5g00602 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Phco5g00602 345 CDD bac_FRK 24 326 - -
Phco5g00602 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Phco5g00602 345 Gene3D - 21 344 IPR029056 -
Phco5g00602 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Phco5g00602 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016301
Phco5g00602 345 FunFam Probable fructokinase-2 22 343 - -
Phco5g00602 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00602 Phco-Chr5 5850892 5854216 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00602 5 5850892 5854216 Phco6g02537 6 46909139 46912342 ECH
Phco5g00602 5 5850892 5854216 Phco5g00602 5 5850892 5854216 ECH
Phco5g00602 5 5850892 5854216 Phco6g02537 6 46909139 46912342 PCT