Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02470 ATGCATAACCAACACACACTCTTACTCAAACTCCCCTCATTGCCTTCTCACTCTCTCACCACCATTCTTCACCCCACAACAAAGACAAAGACAAAGCTCAACAGCACGAGAAGGAAACACACTCGCAGTTCCTCCTTCAGAAGAAGCAATTGGGTTGCCCCCAATGCATTGAGAATGCATTGTACTTCTCGCTGTGGCGGCGATGATAACAACAACCACAACGGTGCCTCTTTCCGCAACTCCAAGCTGAACGAGTCAACCTTCCTGGCTTCTCTCATGCCCAAGGCGGAGATTGGCGCTGACCGTTTCCTCCATGCTCACCCACATTACGACGGGCGCGGTGCTCTCATTGCTATCTTCGATTCTGGGGTAGACCCGGCTGCAGCTGGATTACAGGTTACCTCAGATGGGAAACCAAAAATTCTCGATATTATTGATTGCACTGGGAGCGGAGACGTTGATACCTCAAAGGTGGTAAAGGCTGATGCGGATGGTTGTATTTTGGGGGCTTCCGGGGCATCTTTGGTCATCGATACTGCATGGATAAATCCCTCTGGTGACTGGCATGTGGGTTATAAATTGGTTTATGAGCTCTTCACAGAAAATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCAAAGGCTGTAAAGCAGCTTGCTGATTTTGATCAGGAACACAAGAAGGTGGAGGAAGCTAATCTTAAAAGGGTTCGTGAAGACCTTCAGAATAAGCTTGATCTTCTGAAGAAGCAATCTGAGATTTATGATGATAAAGGGCCTGCCATAGATGCTGTTGTCTGGTATGATGGAGAGGTTTGGAGGGTTGCAATTGACACACAGAGTCTTGAGGATGATCCAGACTGTGGGAAACTTGCTAACTTTGTACCCTTAACTAATTACAGGACTGAGAAAAAGTATGGTATCTTCAGCAAATTAGATGCTTGTACATATGTTGTGAATGTCTATAATGATGGAAATGTCTTAAGTATGGTAACAGATTGCTCCCCTCATGGCACCCATGTTGCTGGTATAGCTGCTGCATTCCACCCAGAGGAACCTTTGTTGAATGGAGTTGCACCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTCTGACTAGGGCAATGATAGCTGCTGTGGAGCATAAATGTGATCTTATCAATATGAGTTATGGTGAGCCTACTTCACTGCCAGACTATGGACGGTTCGTTGACCTTGTGAATGAAGCAGTAAACAAGCATCGACTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGAGCCCCTGGTGGTACATCTTCAAATATTATAGGTGTTGGAGCTTATGTTTCTCCTGCAATGGCTGCTGGTGCTCATTCTGTTGTTGAACCTCCTTCCGATGGGCTTGAATACACATGGTCTAGTCGCGGACCAACAACTGATGGAGATGTTGGTGTCTCTGTAAGTGCTCCTGGTTGCGCAGTTGCTCCTGTTCCTACATGGACTCTTCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGTGGAATTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAGAATACATCTGTTCCCATTGGTGGTTCACCTGAGGATAAGTTGACCACTGGACAAGGGCTTATGCAAGTTGACAAATCTTATGAATATATAAAGCAGTCTCAAAATATTCCAAGTGTTTGGTACCAAATAATGGTCAAGAAATCTGGAAAAACAAAGCCTTGGTCACGGGGCATCTACTTGAGGGAGGCTAATGATTGCCGACAACCTATGGAGTGGACGGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAACAAGCTTGAGGAATTGGCTATGTTTGAGGAGTTCATTGAGTTACACTCATCAGATGAGACAGTTGTGAAAGCCCCCGAGTATCTACTGCTCACTCATAATGGCCGTACCTTCAACATAATTGTGGATCCTACCAATTTAAATGATGGTCTGCATTACTATGAGCTTTATGGTATTGACTGCAAAGCACCATGGCGTGGCCCTATTTTCAGAATTCCAATTACTGTAACCAAGCCCATGGCTGTAACTGACAGACATCCTCTAGTTTCATTTTCAAATATGTTATTCCTTCCAGGCCATGTTGAGAGGAAGTATATAGAAGTGCCAAATGGTGCATCTTGGATTGAAGCAACTATGAAAGCATCAAGTTTTGATACAGTTCGAAGATTTTTTGTGCACACAGTTCAGATATGTCCATTGCGAAGACCTTTAGCACGGAGGAATGCCATAACTTTTTCTTCTCCTGCTACCAAAAGCTTCAACTTTAGGGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGCATTGGCAGTCATGAGACCTCCATGGTGGATCTTGAGGTTATGTTTCATGGTATAAAAGTCAATCAAGAGGAAATTGTACTTGATGGAAGTGAAGCACCAATCAGAATTGATGCTGAAGCGCTACTGGCATCTGAGAAACTTACACCTGTAGGAGTTCTAAATAAGATAAGGGTCCCCTATCGGCCGATAGATGCTATGATTAGTTCACTTTCAAGTGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTAGCATTGACATTAACGTACAAGATCAAATTGGAAGACGGAGCTGAAATAAAACCTCAAATACCATTCCTAAATAATCGGATATATGATACTAAATTTGAGTCTCAATTTTACATCATTTCCGATTCAAACAAGAAAGTATATTCAAGTGGAGATGCCTATCCAAACTCTACAAAACTTCCCAAGGGAGAATACAATTTACAACTGTATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAAGCAGCTGGTGTTATTCATCCAGCGGAATTTAGAAGAGAAGGACATCATTCCATTATGCTTTTTCTCTGAACCTGATGGTCCAGTGATAGGAGATGGTTCCTTTAAGTCCTCAACGTTAGTTCCAGGTATAAAAGAAGGATTTTATCTTGGTCCTCCACCAAAAGACAAACTTCCCAAGAACTCTCTACAAGGATCTGTGTTGGTGGGATCAATATCATATGGTAAAGTATCATTTGCTGCTCAACAAAATGGTAAAAGTCCAGAAAAGCATCCTGTGTCACATCGGGTTTCTTATATCATTCCCCCAAATAAGGTTGACGAGGACAAGGGAAAAAGTTCTTCCTTATCTTCCAAGAAGACAGTTTCTGAAAGGTTAGAACAAGAGGTACGAGATGCAAAAATAAAAGTGTTTGGCGGTCTAAAACAAGGAACCAATGAAGAGTGCTTGGAATGGAAGGAGTTGTCTGCCTCGCTCAAAACTGAATATCCAAAGTACACACCGTTGCTTGCAAAGATTTTAGAAGGTTTAGTTTCCAGAAGTTATATCAAAGACAAATTTCTTCATCATGAAGAGATAATTGATGCAGCTGATGAGGTTATTAACAGTATTGATAAAGAAGAGTTAGCAAAATATTTTGCAGTAAAAAATGATCCAGGAGACGAGGAAGCAGAGAAAATCAAGAAGGAGATGGACTCAACCCGTGGTCAGTTGGCAGAGGCACTTTACCAAAAGGGGCTTGCCCTGGCAGAAATTGCGTCTTTGAAGGAGGTAGATGCGTCCTTGGCTTCGGTTGCTACAGAAGGTGCAAAACAAGATGTGGAGAAAACTGATGAGCAATCCAAGGATGATGACGTTCATCCAGACTTGTTCAAAGAGAACTTCAATGAACTGAAGAAATTGGTTGATGTAAAGTGTAGAAAATATGGAATCCTGTTGGTGACAAACGAGAGGCGTAATCAAAGGCTTGGGACAGCGTTGAAGGTACTGAATGATATCATTCAAGATGATGCAGAACCTGCCAAGAAGAAATTCTATGAACTAAAGCTCTCTTTGCTTGAGGAAATTGGATGGACTCATTTTTGTACATATGAGAGGGAATGGATGCTTGTGCGTTTCCCCCCAAGCTTGCCCCCTTTCTAG 4137 0.4276 MHNQHTLLLKLPSLPSHSLTTILHPTTKTKTKLNSTRRKHTRSSSFRRSNWVAPNALRMHCTSRCGGDDNNNHNGASFRNSKLNESTFLASLMPKAEIGADRFLHAHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKILDIIDCTGSGDVDTSKVVKADADGCILGASGASLVIDTAWINPSGDWHVGYKLVYELFTENLTSRLKKERKKKWDEKNQEEIAKAVKQLADFDQEHKKVEEANLKRVREDLQNKLDLLKKQSEIYDDKGPAIDAVVWYDGEVWRVAIDTQSLEDDPDCGKLANFVPLTNYRTEKKYGIFSKLDACTYVVNVYNDGNVLSMVTDCSPHGTHVAGIAAAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRAMIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSNIIGVGAYVSPAMAAGAHSVVEPPSDGLEYTWSSRGPTTDGDVGVSVSAPGCAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYSVRKALENTSVPIGGSPEDKLTTGQGLMQVDKSYEYIKQSQNIPSVWYQIMVKKSGKTKPWSRGIYLREANDCRQPMEWTVQVDPKFHEDANKLEELAMFEEFIELHSSDETVVKAPEYLLLTHNGRTFNIIVDPTNLNDGLHYYELYGIDCKAPWRGPIFRIPITVTKPMAVTDRHPLVSFSNMLFLPGHVERKYIEVPNGASWIEATMKASSFDTVRRFFVHTVQICPLRRPLARRNAITFSSPATKSFNFRVVGGQTLELVIAQFWSSGIGSHETSMVDLEVMFHGIKVNQEEIVLDGSEAPIRIDAEALLASEKLTPVGVLNKIRVPYRPIDAMISSLSSDRDKLPSGKQILALTLTYKIKLEDGAEIKPQIPFLNNRIYDTKFESQFYIISDSNKKVYSSGDAYPNSTKLPKGEYNLQLYLRHDNVQILEKMKQLVLFIQRNLEEKDIIPLCFFSEPDGPVIGDGSFKSSTLVPGIKEGFYLGPPPKDKLPKNSLQGSVLVGSISYGKVSFAAQQNGKSPEKHPVSHRVSYIIPPNKVDEDKGKSSSLSSKKTVSERLEQEVRDAKIKVFGGLKQGTNEECLEWKELSASLKTEYPKYTPLLAKILEGLVSRSYIKDKFLHHEEIIDAADEVINSIDKEELAKYFAVKNDPGDEEAEKIKKEMDSTRGQLAEALYQKGLALAEIASLKEVDASLASVATEGAKQDVEKTDEQSKDDDVHPDLFKENFNELKKLVDVKCRKYGILLVTNERRNQRLGTALKVLNDIIQDDAEPAKKKFYELKLSLLEEIGWTHFCTYEREWMLVRFPPSLPPF 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02470 1378 MobiDBLite consensus disorder prediction 1101 1121 - -
Phco6g02470 1378 FunFam Tripeptidyl-peptidase 2 608 739 - -
Phco6g02470 1378 ProSiteProfiles Serine proteases, subtilase domain profile. 97 595 - -
Phco6g02470 1378 Pfam Subtilase family 112 578 IPR000209 GO:0006508|GO:0008236
Phco6g02470 1378 FunFam tripeptidyl-peptidase 2 isoform X1 95 180 - -
Phco6g02470 1378 ProSitePatterns Serine proteases, subtilase family, histidine active site. 348 358 IPR022398 -
Phco6g02470 1378 FunFam Tripeptidyl-peptidase 2 156 217 - -
Phco6g02470 1378 Gene3D Peptidase S8/S53 domain 273 606 IPR036852 GO:0004252|GO:0006508
Phco6g02470 1378 Gene3D - 608 741 IPR046940 -
Phco6g02470 1378 Coils Coil 1114 1134 - -
Phco6g02470 1378 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 92 574 IPR034051 GO:0006508|GO:0008240
Phco6g02470 1378 SUPERFAMILY Subtilisin-like 93 610 IPR036852 GO:0004252|GO:0006508
Phco6g02470 1378 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Phco6g02470 1378 PRINTS Subtilisin serine protease family (S8) signature 344 357 IPR015500 -
Phco6g02470 1378 PRINTS Subtilisin serine protease family (S8) signature 112 131 IPR015500 -
Phco6g02470 1378 FunFam Tripeptidyl-peptidase 2 homolog 272 605 - -
Phco6g02470 1378 Gene3D - 156 222 - -
Phco6g02470 1378 Gene3D - 1118 1378 IPR046939 -
Phco6g02470 1378 MobiDBLite consensus disorder prediction 31 45 - -
Phco6g02470 1378 Coils Coil 223 269 - -
Phco6g02470 1378 PANTHER PEPTIDASE S8 95 995 - -
Phco6g02470 1378 Pfam Tripeptidyl peptidase II 875 1059 IPR022229 -
Phco6g02470 1378 MobiDBLite consensus disorder prediction 28 47 - -
Phco6g02470 1378 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02470 Phco-Chr6 46089040 46112648 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02470 6 46089040 46112648 Phco6g02470 6 46089040 46112648 ECH
Phco5g00702 5 7556172 7577794 Phco6g02470 6 46089040 46112648 PCT