Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00702 ATGACTGGGCTCAGCTCCTCGTTCGAAATTACTAAAACACCCTCTCTACCTCTTCATCACAACAAAACCAACGACGGACACGCTATCCACCCTCGCATCACCATCTCCATTTTCATCATTCCCGAGGCTCTGGCTCTCACGCAATACACTGATCAGGCTCGCAGACACACGCGCTCACACACACAAAGAGCTTCGTCCTTAGAGAGCTTCTCATCGAAACGCCACCGTATCTTGCACAGGCCAATGCCGTGTTCTTCCTCCACTTCCACCACCACCGGCGATAACAGCAGCAACACCAGTAATAAGAAAAGAGATGGCTCTTCCTCTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTCCTAGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCCATCTTCGATTCTGGTGTAGACCCTGCTGCTGATGGATTACAGATTACCTCGGATGGAAAACCAAAAGTTCTCGACGTCATTGATTGCACAGGAAGTGGTGATATTGATATCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCATATTTGTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTATTCACGGAAACTTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAACTTGCTGACTTTGATCAGCAACACATCAAGGTAGAGGATGTACATCTTAAAAGGGCCCGGGAAGATATCCAGAATAGACTTGATATTCTGAGAAGGCAATCTGAGAGCTATGATGATAGAGGGCCTGTCATAGATGCTGTTGTCTGGCACGATGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATAGCGGAAAGCTTGTTAATTTTGTGCCTTTAACTAATTATAGGATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCCTGTACATTTGTTGTTAATGTCTATAATGATGGGAATGTCTTGAGTGTCGTAACTGACAGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCGCAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTAACTCGGGCACTGATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTACGGGCGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACTTCCTCAAGTATCATAGGCGTTGGTGCATATGTGTCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCTTCCAATGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTCAGTGCTCCAGGTGGTGCTGTTGCTCCTGTTCCCACATGGACTCTGCAAAGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGAGGAACTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGGATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATGTTCCGAGTGTTTGGTATCAAATAAACATCCAGCAATCTGGAAAAACTAATCCTTCATCAAGGGGAATCTACCTCAGGGAGGCTAGTGCTTGCATGCAATCTACTGAGTGGACAGTTCAAGTTAATCCAAAATTTCATGAAGATGCTGACAACTTAGAGGATTTGGTTCCATTTGAGGAGTACATTGAATTACATTCTACAGAAGAGACAGTTGTGAAGGCCCCTGACTACCTATTGCTCACTCATAATGGTCGCACCTTCAATGTAGTGGTTGATCCTTCCAATCTTTCTGATGGTCTTCATTACTTCGAGGTCTATGGTATTGACTACAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCTAAGGCTGTAACTAACCTGCCTCCACAAATTTCTTTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGAAGATACATCGAAGTGCCCCATGGTGCAACTTGGGCTGAAGCAACGATGAAAACATCAGACTTCGACACAGCAAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGACTGCTGTAACTTTTCCTTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTCATTTCTCAGTTCTGGTCAAGTGGCATAGGGAGTAATGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGAATAAAAGTCAATCAAGATGTTATACTTGATGGTAGTGACGCACCAGTTAGGATTGACACTGAAACTCTACTGGTATCTGAGGAACTTGCACCTGTGGCAATTCTAAACAAGATTAGGGTACCATATCGACCAGTAGATTCTAAGATTATTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGAAAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACGTACCATTGTTAAATGACCGGATATATGACACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCAAACAAGCGCATATATTCAAGTGGGGATGTCTATCCAAGTTCTTCTAATCTTCCCAAAGGAGAATATACTTTACAGTTTTATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGCCATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGATGGGAAATGGTTCCTTTAAGTCCTCATCTCTAGTTCCAGGTATAAAAGAAGGATTATATATTGGTCCACCACAAAAAGAAAAGCTTCCCAAGAATTCTCCACAGGGATCTGTATTGCTAGGGACAATTTCATATGGGAAACTATCATTTGCTGGCCAGGGAGAAAATAAAAATCCTGAAAAGCACCCTGCTTCATATACAATTTCTTATATAGTTCCCCCAAACAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGACTGCTTCAGAACGCTTAAACGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGGTGAAGAGCGCTTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCGAAGTACACTCCATTACTTGCAACCATTTTGGAAGGTTTAGTTTCTAGGAGTAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTGGTGCAGCCGATGAGGTGATTGACAGTATTGATAGAGAAGAGCTGGCAAAATTTTTTGCACTAAAAAATGATCCAGAAGAGGAAGAAGCAGAGAATATCAGGAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGGACGTAGATAAGTCCCCGACTTTGGCTGGCACAGAAGGGGCAAAAGGAGGCTTGGACAAAAAACAATCTACAGATGATCGCAGAGATTTGTTTGAAGAGAATTTCAAAGAACTGAAGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATCCTCTTAGTAACACGTGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCTGAGCCTGCCAAAAAGAAATTCTACGATCTAAAACTGTCTTTGCTTGATGAGATTGGATGGACACATTTAGCCACATACGAAAGACAGTGGATGCATGTGCGTTTCCCTCCAGGCTTGCCTCTTTTCTAG 4218 0.436 MTGLSSSFEITKTPSLPLHHNKTNDGHAIHPRITISIFIIPEALALTQYTDQARRHTRSHTQRASSLESFSSKRHRILHRPMPCSSSTSTTTGDNSSNTSNKKRDGSSSLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKVLDVIDCTGSGDIDISKVVKADADGHICGASGASLVINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDEKNQEEIAKAVKQLADFDQQHIKVEDVHLKRAREDIQNRLDILRRQSESYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLVNFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSVVTDSSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSNGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPSVWYQINIQQSGKTNPSSRGIYLREASACMQSTEWTVQVNPKFHEDADNLEDLVPFEEYIELHSTEETVVKAPDYLLLTHNGRTFNVVVDPSNLSDGLHYFEVYGIDYKAPWRGPLFRIPITITKPKAVTNLPPQISFSKMLFQPGHIERRYIEVPHGATWAEATMKTSDFDTARRFYVDAVQLCPLQRPLKWETAVTFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSNETASVDFEVVFHGIKVNQDVILDGSDAPVRIDTETLLVSEELAPVAILNKIRVPYRPVDSKIIALSTDRDKLPSGKQILALTLTYKIKLEDGAQIKPHVPLLNDRIYDTKFESQFYMISDSNKRIYSSGDVYPSSSNLPKGEYTLQFYLRHDNVQILEKMRHLVLFIERNLEEKDAIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGLYIGPPQKEKLPKNSPQGSVLLGTISYGKLSFAGQGENKNPEKHPASYTISYIVPPNKIDEDKGKGSSLSSKKTASERLNEEVRDTKIKVLASLKQETGEERLEWKELSALLKSEYPKYTPLLATILEGLVSRSNVKDKINHDEEVIGAADEVIDSIDREELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKDVDKSPTLAGTEGAKGGLDKKQSTDDRRDLFEENFKELKKWVDVKSAKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLATYERQWMHVRFPPGLPLF 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00702 1405 Pfam Tripeptidyl peptidase II 906 1090 IPR022229 -
Phco5g00702 1405 ProSiteProfiles Serine proteases, subtilase domain profile. 129 627 - -
Phco5g00702 1405 MobiDBLite consensus disorder prediction 1 20 - -
Phco5g00702 1405 MobiDBLite consensus disorder prediction 1135 1154 - -
Phco5g00702 1405 Pfam Subtilase family 144 607 IPR000209 GO:0006508|GO:0008236
Phco5g00702 1405 FunFam Tripeptidyl-peptidase 2 188 249 - -
Phco5g00702 1405 SUPERFAMILY Subtilisin-like 124 637 IPR036852 GO:0004252|GO:0006508
Phco5g00702 1405 MobiDBLite consensus disorder prediction 82 104 - -
Phco5g00702 1405 Gene3D - 1149 1405 IPR046939 -
Phco5g00702 1405 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Phco5g00702 1405 PRINTS Subtilisin serine protease family (S8) signature 376 389 IPR015500 -
Phco5g00702 1405 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Phco5g00702 1405 MobiDBLite consensus disorder prediction 1 24 - -
Phco5g00702 1405 MobiDBLite consensus disorder prediction 51 109 - -
Phco5g00702 1405 PANTHER PEPTIDASE S8 89 1026 - -
Phco5g00702 1405 Gene3D - 188 252 - -
Phco5g00702 1405 FunFam Tripeptidyl-peptidase 2 homolog 304 637 - -
Phco5g00702 1405 Coils Coil 1250 1270 - -
Phco5g00702 1405 FunFam Tripeptidyl-peptidase 2 640 771 - -
Phco5g00702 1405 Gene3D Peptidase S8/S53 domain 304 638 IPR036852 GO:0004252|GO:0006508
Phco5g00702 1405 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 124 606 IPR034051 GO:0006508|GO:0008240
Phco5g00702 1405 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Phco5g00702 1405 FunFam Tripeptidyl-peptidase 2 1149 1405 - -
Phco5g00702 1405 Gene3D - 640 771 IPR046940 -
Phco5g00702 1405 FunFam tripeptidyl-peptidase 2 isoform X1 127 212 - -
Phco5g00702 1405 Coils Coil 281 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00702 Phco-Chr5 7556172 7577794 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00702 5 7556172 7577794 Phco5g00702 5 7556172 7577794 ECH
Phco5g00702 5 7556172 7577794 Phco6g02470 6 46089040 46112648 PCT