Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02399 ATGTCAGTGTACAAAGAATATTCTCTTTTGATGTATATTTTCTGTAATAACACCCATCATGATGATGGTCAATTCGATAGAAACGAAGTTGTGTTATATGTCTTCTGTCGTGTTCTCGGTTCCCCCACTTTATACCTGTCTCATGACCTGACCTCTGTCCAACACAATTCCACCTTCTTCATCTTCTTCTCCACCCTTTTATCCTTCGTACCTTCTGCATACTGCATTTTTCTTTCTCTCTCTCTCTCTGCAAAAATGTCTCAGGTTGTTGCCACGCGATCCTTTCACTCCTCCCTCACGCGCCCCACCTCAGGATCTGCACACCACAGGCTGCTAACATCATTGAAGCCTCCAACTTTTGCTTCGAAAGTATGCCCGCAACAAAGGAACGCCCCCTCTAAAGTTCGCTACCCCAGTTGCCGCGTCAATGCGAGGAAATCTGCACCCGCTGAAGTTGTCCCCGTGTCACCCGAGGATGATTCAAAGATTGAGGAGGAGTTGCAGCAGTTGCGTGGGATGCAGCTACTTGGTGACACTGCGGTTGGAATGTGGTCCAAACCCACGTTTAGGAGGAAGACAAAGATTGTCTGTACCATTGGTCCTTCTACCAACACCAGGGAAATGATCTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCCCGTATGAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTTATTGATTTGGTTAAAGAGTATAATGCTCAGTCCAAGGACAATGCCATTGCAATTATGCTTGATACCAAGGGTCCCGAAGTTAGGAGTGGGGATTTGCCTCAACCAATTGTGTTAACACCTGGGCAGGAATTCACTTTTACCATCCGGAGAGGTGTTGGAACTGCAGACTGTGTTAGCGTGAACTATGATGATTTTGTCAATGATGTGGAAGTGGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCTTTGGTGGTGAAGTCTAAGACAGGGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGAGACATTTGAATGTTCGAGGAAAAAGTGCAACACTGCCTTCCATCACTGAGAAGGATTGGGATGACATCAAATTTGGAGTGGATAACAAAGTTGATTTCTATGCTGTTTCTTTTGTGAAGGATGCACAAGTAGTTCATGAACTGAAGAATTATTTGAAAAGCTGTGATGCTGATATACACGTCATTGTAAAAATTGAAAGTGCAGACTCTATACCAAACTTGCATTCAATTATTACAGCATCTGATGGGGCCATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAGCATATGCCGTAGCATGGGAAAGGCCGTTATTGTGGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCTGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGCTTTCTGGGGAAACTGCTCACGGCAAGTTTCCACTAAAAGCTGTGAAAGTAATGCACACTGTAGCATTACGGACAGAAGCCACTATAACTGATGGTCGGTTGCCACCTAATATTGGGAATGTATTCAAGAACCACATGAGTGAGATGTTTGCTTACCATGCAACCATGATGTCTAATACCCTTGGAACCTCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATCCTTTTGAGCCACTATCGACCTTCAGGCACTATATTTGCTTTTACAGATCAAAAGAGGACACAACAGAGGTTGGCTTTGTATCAAGGAGTCTGTCCTATTTACATGGAATTCTCAAAAGATGCCGAAGAGACTTTCACAAGAGCCCTTGATCTGTTGCAGAAGCTAGGAATGGTGAAAGCAGGAGAAGAAGTGGCACTAGTACAAAGTGGCAAGCAACCCATATGGAGGTTCCAATCCACTCACAATATCCAGGTCCGAACAGTGTAA 1983 0.4443 MSVYKEYSLLMYIFCNNTHHDDGQFDRNEVVLYVFCRVLGSPTLYLSHDLTSVQHNSTFFIFFSTLLSFVPSAYCIFLSLSLSAKMSQVVATRSFHSSLTRPTSGSAHHRLLTSLKPPTFASKVCPQQRNAPSKVRYPSCRVNARKSAPAEVVPVSPEDDSKIEEELQQLRGMQLLGDTAVGMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARMNMSHGDHASHQKVIDLVKEYNAQSKDNAIAIMLDTKGPEVRSGDLPQPIVLTPGQEFTFTIRRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSLVVKSKTGDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCDADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIISICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVALRTEATITDGRLPPNIGNVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPSGTIFAFTDQKRTQQRLALYQGVCPIYMEFSKDAEETFTRALDLLQKLGMVKAGEEVALVQSGKQPIWRFQSTHNIQVRTV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02399 660 ProSitePatterns Pyruvate kinase active site signature. 401 413 IPR018209 GO:0004743|GO:0006096
Phco6g02399 660 PANTHER PYRUVATE KINASE 168 638 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 Gene3D - 534 660 IPR036918 -
Phco6g02399 660 FunFam Pyruvate kinase 522 641 - -
Phco6g02399 660 Pfam Pyruvate kinase, barrel domain 191 526 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 430 454 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 403 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 249 265 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 373 387 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 499 515 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 455 479 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 PRINTS Pyruvate kinase family signature 480 498 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 FunFam Pyruvate kinase 261 354 - -
Phco6g02399 660 FunFam Pyruvate kinase 356 521 - -
Phco6g02399 660 SUPERFAMILY PK C-terminal domain-like 509 660 IPR036918 -
Phco6g02399 660 Gene3D - 193 518 IPR040442 -
Phco6g02399 660 NCBIfam pyruvate kinase 191 660 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g02399 660 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 182 525 IPR015813 GO:0003824
Phco6g02399 660 SUPERFAMILY PK beta-barrel domain-like 260 351 IPR011037 -
Phco6g02399 660 Pfam Pyruvate kinase, alpha/beta domain 548 640 IPR015795 -
Phco6g02399 660 Gene3D - 261 354 IPR015806 GO:0004743|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02399 Phco-Chr6 45374324 45380153 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02399 6 45374324 45380153 Phco6g02399 6 45374324 45380153 ECH
Phco5g00854 5 11620725 11625852 Phco6g02399 6 45374324 45380153 PCT