LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco6g02367	ATGATGGGTAGTAATGAGATTGAATGTTTGTCCCAAGAAGTGTCGGAAGGGTTTTTTTATGGTCTGCAGAAGAAAGATCTCAAACAAATGGAGATAAAGTCTCAGGGTGAGAATGAGAAGTTTGGTGAAGCTTCTTCTGAGGACGACGAGCCGGTGCAAGTTTCTTCTTCCTCACGAAGAGGTGTGGAACATTGCGTCACAGCCCCTGTTGGAGCTGAAAGGAACCCACTGAGAGTTGATGACGAGTTTATGATTTCTAGATCAATAACAGAAAAGAGGGGATTCCCTAAGCGAGACACACTATTGGACAGGCTGTCTGAGCGGGCAAAGCAATTGATTACTAACTTAGTGAAGATACAAAATGATGGGACTGTTGAAGTTGATCTAGAAAGGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTACAATCTTTTGAAGAGTCAACAGTGAGTGGAGGTCTTGGTTCAGAATCAAAAAAATCTGTTCCACGGTTACAAATTGTCATACTTGTGGTTGGAACAAGAGGCGACGTACAACCTTTTCTGGCCATAGCGAAGAGACTTCAGGAGTATGGTCATCATGTTAGGCTGGCAACACATGCTAATTTCAAAACATTTGTAAAGTCAGCTGGTGTAGATTTCTATCCTCTGGGTGGTGATCCTCGTGTTTTGGCAGGATATATGGCTAGGAATAAAGGTTTAATCCCTTCTGGACCGGCTGAAATATCTGTCCAAAGAAAGCAGCTGAAGGCCATCATTGATTCCCTTCCTCCAGCATGCACAGCACCTGATATGGAAAGTGGTGTTCCTTTCAGAGCTCAAGCTATTATTGCCAATCCTCCTGCTTATGGACATGTACATGTTGCTGAAGCCCTTGGGGTGCCCCTCCATATCTTCTTCACAATGCCATGGACACCAACATATCAGTTCCCCCACCCTTTGGTACGTGTTCCTCAAAATGCTGGTTATTGGCTGTCCTATATAATTGTAGATCTGCTGATATGGTGGGGAATGCGAAGAATTATTAATAACTTCAGGAAATCGACATTGAAGCTTGCTCCTATTGCATACTTCAGTATGTATCGTGGATCAATATCTCATTTACCGACTAGCTATATGTGGAGTCCTCATGTTGTTCCAAAACCAAGTGATTGGGGCCCTTTAGTTGATGTTGTTGGTTACTGTTTCTTGAGCCTTGCATCAAAGTATCAACCTCAGGAAGATTTTGTCCAATGGATTAAAAAGGGGCCACCTCCTTTGTATTTTGGGTTTGGGAGCATGCCTCTTGAAGATCCCAAAGGAACAACAGATGTTATTTTGGAGGCACTAAGAGATACGGAACAGCGGGGAATTATTGACCGGGGTTGGGGCAATCTAGGGAATTTGGCAGAACTTTCTGACAACGTTTTCCTTCTGGAGGAATGCCCTCACGATTGGCTGTTTCCTCAATGTTCTGCTGTGGTGCATCATGGTGGAGCTGGAACCACGGCTACAGGATTAAAAGCTGGGTGTCCAACAACCATAGTTCCATTCTTTGGAGATCAATTCTTTTGGGGAGAGAGAATATATCAGAAAGAATTGGGACCCGCTCCAATCCCAATATCTCAGCTCAACGTTGAGAATTTATCAAATGCCATTAGATTCATGCTCCAGCCAGAGGTGAAGTCTCGAGCAAAGGAAATTTCTAAGTTGATCGAGAATGAAGATGGTGTTGCTGCAGCAGTTGATGCATTCCATCGACATCTGCCTGATGAGTTGCCGCTGCCAACCCCATCTCTGGAGGAGGATGAACACTTGAATCCTTTGCAGTGGTTTTTTCTCCAACTTGGAAGGTTCTGTTGTGCTCCTTGTGGTGGTGTGTAG	1863	0.4423	MMGSNEIECLSQEVSEGFFYGLQKKDLKQMEIKSQGENEKFGEASSEDDEPVQVSSSSRRGVEHCVTAPVGAERNPLRVDDEFMISRSITEKRGFPKRDTLLDRLSERAKQLITNLVKIQNDGTVEVDLERSASVAPELLELQSFEESTVSGGLGSESKKSVPRLQIVILVVGTRGDVQPFLAIAKRLQEYGHHVRLATHANFKTFVKSAGVDFYPLGGDPRVLAGYMARNKGLIPSGPAEISVQRKQLKAIIDSLPPACTAPDMESGVPFRAQAIIANPPAYGHVHVAEALGVPLHIFFTMPWTPTYQFPHPLVRVPQNAGYWLSYIIVDLLIWWGMRRIINNFRKSTLKLAPIAYFSMYRGSISHLPTSYMWSPHVVPKPSDWGPLVDVVGYCFLSLASKYQPQEDFVQWIKKGPPPLYFGFGSMPLEDPKGTTDVILEALRDTEQRGIIDRGWGNLGNLAELSDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGERIYQKELGPAPIPISQLNVENLSNAIRFMLQPEVKSRAKEISKLIENEDGVAAAVDAFHRHLPDELPLPTPSLEEDEHLNPLQWFFLQLGRFCCAPCGGV	620

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco6g02367	620	Gene3D	Glycogen Phosphorylase B;	167	570	-	-
	Phco6g02367	620	MobiDBLite	consensus disorder prediction	31	47	-	-
	Phco6g02367	620	Pfam	Glycosyltransferase family 28 N-terminal domain	167	308	IPR004276	GO:0005975\|GO:0016758\|GO:0030259
	Phco6g02367	620	MobiDBLite	consensus disorder prediction	31	61	-	-
	Phco6g02367	620	Pfam	UDP-glucoronosyl and UDP-glucosyl transferase	421	563	IPR002213	GO:0008194
	Phco6g02367	620	Gene3D	Glycogen Phosphorylase B;	396	565	-	-
	Phco6g02367	620	PANTHER	STEROL 3-BETA-GLUCOSYLTRANSFERASE	73	609	-	-
	Phco6g02367	620	Coils	Coil	102	122	-	-
	Phco6g02367	620	CDD	GT1_Gtf-like	167	581	IPR002213	GO:0008194
	Phco6g02367	620	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	167	582	-	-
	Phco6g02367	620	FunFam	Sterol 3-beta-glucosyltransferase UGT80A2	396	565	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco6g02367	Phco-Chr6	44887760	44900529	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco5g00968	5	16067706	16085382	Phco6g02367	6	44887760	44900529	PCT