Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00968 ATGGGATTTCGCAGTCTAACTTTAGTAAGCAAGGCACTTTCCACTACTCTTGTTCTGGGTTTTCTCTGCCATAGGTTGGAAGGTGGAGCTTGTACTTGTGTTGAAGAGTTAAAAGGAGAAACTGGTACAAGTCTTCATGAGCTTGAGATTCTGAGATGGTCAGTAATGGGATTGAATATTTGTCCAAAGTCTAAAGAATCATTAGAAGGTTTTGATTGCAAACGAAAGGAAGAGCTTCGTCAGATGGGACACGACGAGTTGGTGACAGTTGAAAACGTATCCGGAGATGAGGTTGAATCAACTGCTTCTGAGAAGGAAGAGAATCGTAGTGAAAATTTGAAGCAGAATTCTTCAGAGCTTAATTGTGCACTTGGAGTTGGTTTGGACCATTTCATACCAGAGCCTGTTGGAACTGAGAGTAACCTGCTTGTTGCTGCTTCTGATGAGATTATGTTTTCTAAATCAATGATGGAATTTTGGGATTCTCCAAGGCAAGACCTAATAGTGGACAGGCTATCAGAGTGTGAGAAGCAAAAGCTGCTTAACCTTGTGAAGATACAAAATGATGGGACTGTTGAAGTTGATCTGGAAAAAGATGCAACTCTTGTATCAGAATTGTTGAAGTTTCAATCTTTTGAAGAGTCAACAATGAGTGCAAGTGTTTCTGAATCAAAAATATCAGCTCCCTGGTTACAAATTGTCATGCTTGTGGTTGGGACCAGAGGCGATGTACAACCTTTCCTGGCCATCGCAAAAAAACTCCAGGACTATGGTCATCGTGTTAGGCTGGCAACACATGCAGATTTTGACACATTTGTAAAGAGTGCTGGTGTTGATTTCTATCCGTTGGGTGGTGATCCTCGTGCTTTGGCAAGATATATGGTGAGGAATAAAGGTATAATCCCATCTGGTCCAACTGAAATATCTATCCAAAGAAAGCAGCTGAAGGCTATTATTGATTCTCTTCTTCCAGCATGCATAGAACCTGATTTGGAAACTGGTGTTCCTTTCAGAGCTCAGGCCATTATAGCCAATCCTACTGCATGTGGACATACACACATTGCTGAAGCCCTTGGGGTGCCCCTTCACATCTTCTTCACTATGCCTTGGACGCCAACATATGAGTTTTCACACCCTTTGGCACGTGTTCCTCAAAGTGCTGGTTATTGGTTGTCATATATAATTGTGGATGTACTAATATGGTGGGGAATACGAGGACTTATCAACGACTTCAGGAAAAGAAAATTGAAGCTCGCTCCTATTGCATACTTCAGTATGTACAGTGGATCAATAAATCATTTACCTACTGGCTATATGTGGAGTCCTCATGTTGTTGCAAAGCCAACTGACTGGGGCCCCTTAGTTGATGTCGTTGGTTATTGTTTCTTGAACCTTGGATCAAAGTATCACCCACAGGAAGATTTTGTCCGATGGATTCAAAAAGGACCAAAACCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGATGATCCTAAAAGAACTACTGATGTTATAGTGGAGGCACTGAAGGATACAGGACAACGGGGAATTATTGACCGGGGCTGGGGGAATCTAGGCGATTTGGCGGAAGTTCCCGACAATGTTTTCGTGCTAGAGGAATGCCCTCATGACTGGTTGTTTCCCCAATGTTCTGCTTTGGTACATCATGGTGGTGCTGGAACAACGGCTACAGGACTAAAGGCTGGGTGTCCAACAACCATTGTTCCATTCTTTGGAGATCAATTCTTTTGGGGAGACAGAATTTATCAGAAAGGGCTGGGACCTATTCCAATTCCTATATCTCAGCTTAGTCTTGAAAATTTAACAAATGCCATAAAATTCATGCTCCAGCCCGAGGTAAAATCACAAGCAATGGCAATCGCAAAGTTGATTGAGAATGAAGACGGTGTTACAGCTGCAGTTGATGCGTTTCACCGCCATCTACCACCAGAATTACCACTACCAACTCCATCTCCAGAGGTGGAGGACCATGCAAATCCTTTGCAGTGGTTTTTTCTTCATCTAGCGAAGTTGTGCACTTTACCATGTGGGAGTGTATAG 2061 0.4275 MGFRSLTLVSKALSTTLVLGFLCHRLEGGACTCVEELKGETGTSLHELEILRWSVMGLNICPKSKESLEGFDCKRKEELRQMGHDELVTVENVSGDEVESTASEKEENRSENLKQNSSELNCALGVGLDHFIPEPVGTESNLLVAASDEIMFSKSMMEFWDSPRQDLIVDRLSECEKQKLLNLVKIQNDGTVEVDLEKDATLVSELLKFQSFEESTMSASVSESKISAPWLQIVMLVVGTRGDVQPFLAIAKKLQDYGHRVRLATHADFDTFVKSAGVDFYPLGGDPRALARYMVRNKGIIPSGPTEISIQRKQLKAIIDSLLPACIEPDLETGVPFRAQAIIANPTACGHTHIAEALGVPLHIFFTMPWTPTYEFSHPLARVPQSAGYWLSYIIVDVLIWWGIRGLINDFRKRKLKLAPIAYFSMYSGSINHLPTGYMWSPHVVAKPTDWGPLVDVVGYCFLNLGSKYHPQEDFVRWIQKGPKPLYFGFGSMPLDDPKRTTDVIVEALKDTGQRGIIDRGWGNLGDLAEVPDNVFVLEECPHDWLFPQCSALVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYQKGLGPIPIPISQLSLENLTNAIKFMLQPEVKSQAMAIAKLIENEDGVTAAVDAFHRHLPPELPLPTPSPEVEDHANPLQWFFLHLAKLCTLPCGSV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00968 686 Coils Coil 103 123 - -
Phco5g00968 686 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 111 677 - -
Phco5g00968 686 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 462 631 - -
Phco5g00968 686 MobiDBLite consensus disorder prediction 92 115 - -
Phco5g00968 686 Pfam Glycosyltransferase family 28 N-terminal domain 233 375 IPR004276 GO:0005975|GO:0016758|GO:0030259
Phco5g00968 686 CDD GT1_Gtf-like 233 647 IPR002213 GO:0008194
Phco5g00968 686 Gene3D Glycogen Phosphorylase B; 462 631 - -
Phco5g00968 686 Gene3D Glycogen Phosphorylase B; 233 636 - -
Phco5g00968 686 MobiDBLite consensus disorder prediction 98 113 - -
Phco5g00968 686 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 233 648 - -
Phco5g00968 686 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 486 630 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00968 Phco-Chr5 16067706 16085382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00968 5 16067706 16085382 Phco5g00968 5 16067706 16085382 ECH
Phco5g00968 5 16067706 16085382 Phco6g02367 6 44887760 44900529 PCT