Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02181 ATGGAATATTCAAAGCAAAACTGTGAGAATGGCAATGGTAACACTAACTATGACCCACTTAACTGGGGCATGGCTGCCGACGCTTTGAGAGGTAGCCACCTTGAGGAGGTGAAGCGCATGGTCGAGGAATATCGTAACCCCGTCGTCACGGTAGGTGGGAAGACACTCACCGTGTCTCAGGTCGCCGCGGTTGCAAACGGCGGCGTGAGGGTGGAGCTGGTGGAGGAAACCCGACATGGTGTAAAAGGCAGCAGTGATTGGGTGAGTGATAGTTTGGCGAACGGCGTTGATACGTATGGGATCACTACAGGCTTCGGTGGAACCTCCTACAGGAGAACCAACCAAGGTGTTGCTCTCCAAAACGAACTCATCAGATTTCTAAATGCTGGTATTTTTGCCAATGATAAAGAAACCTATCATACTTTACCTCACTCAATTACTAGAGCATCCATGTTGGTTAGGACCAACACCTTACTTCAAGGATACTCAGGAATAAGATTTGAAATCATGGAGGTCATAACCAAGTCGAACTCCAAGTCCATTGGACCTAATGGAGAAGTTCTCAATGCTAGAGAGGCCTTTCAATTAGCAGGAATCGATGGTGGTTTCTTTGAGTTGCAACCTAAAGAGGGTTTGGCATTAGTAAATGGTACTACAGTGGGATCTGGCTTAGCATCCATGGTTCTTTTTGAGGTAAACTTACTTGTTGTCCTCTCAGAAGTCTTGGTTGCAATTTTTGTTGAAGCTATGCATGGAAAACCAGAATTTACAGATCACTTAATTCATAAATTGAAGCATCACCCTGGCCAAATTGAGGCTGCAGCCATAATGGAGCACATATTGGATGGAAGTTCATTTGTCAAGGGACACAAAGGTTGCATGAAATTAATCCACTTCAAAAGCATAAACAAGATAGGTATGCTCTTAGAACTTCACCTCAATGGCTTGGACCTCAGATTGAAGTAA 966 0.4462 MEYSKQNCENGNGNTNYDPLNWGMAADALRGSHLEEVKRMVEEYRNPVVTVGGKTLTVSQVAAVANGGVRVELVEETRHGVKGSSDWVSDSLANGVDTYGITTGFGGTSYRRTNQGVALQNELIRFLNAGIFANDKETYHTLPHSITRASMLVRTNTLLQGYSGIRFEIMEVITKSNSKSIGPNGEVLNAREAFQLAGIDGGFFELQPKEGLALVNGTTVGSGLASMVLFEVNLLVVLSEVLVAIFVEAMHGKPEFTDHLIHKLKHHPGQIEAAAIMEHILDGSSFVKGHKGCMKLIHFKSINKIGMLLELHLNGLDLRLK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02181 321 PANTHER HISTIDINE AMMONIA-LYASE 13 175 IPR001106 -
Phco6g02181 321 SUPERFAMILY L-aspartase-like 18 295 IPR008948 GO:0003824
Phco6g02181 321 Gene3D - 180 217 IPR024083 -
Phco6g02181 321 Gene3D - 9 179 IPR024083 -
Phco6g02181 321 Pfam Aromatic amino acid lyase 184 293 IPR001106 -
Phco6g02181 321 Pfam Aromatic amino acid lyase 56 182 IPR001106 -
Phco6g02181 321 Gene3D Fumarase/aspartase (Central domain) 220 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02181 Phco-Chr6 42829340 42832812 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02033 2 51057300 51060779 Phco6g02181 6 42829340 42832812 ECH
Phco6g02181 6 42829340 42832812 Phco6g02181 6 42829340 42832812 ECH