Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02033 ATGAAATGCAAAAGAGGGAATCCTCAAACACTTCAACATTTCCTTTCTCTCTCTCACTCTCTACACAAAACTCATTCTCTTCATTTTATCAAGATGGAAGCAACTACCCTTACCAACGCCCACCAAAACGGTTCCTTCTGCTTGTCCGCCAAGACCACTGATCCGCTCAATTGGGGAACGGCCGCGGAGGCGCTCAAGGGGAGCCACCTCGACGAGGTCAAGCGCATGGTGGCCGAATACCGGCAGCCGCTGGTCCACCTCGGCGGCGAGACGCTCACCATCGCTCAGGTGGCAGCAGTGTCTGGACACGACCAAGGCGTGAGGGTGGAGCTGTCGGAGTCCGCTAGGGAAGGTGTTAAGGCGAGCAGTGAGTGGGTGATGAGCAGCATGAACAATGGCACTGACAGTTACGGCGTCACCACCGGCTTCGGTGCCACCTCACACCGCCGAACCAAAGAAGGTGGTGCTCTGCAGAAAGAACTCATCAGGTTTTTAAACGCTGGAATATTTGGAAATGGAACTGAATCATGCCACACACTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAAGGCTACTCAGGCATCAGATTTGAAATCTTAGAATCCATCACCAAGCTCCTTAACAACAACGTTACCCCATGTTTGCCACTTCGTGGTACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCCTATATTGCCGGTTTGCTCACTGGCAGACCTAACTCCAAAGCTGTTGGACCTTCTGGAGAAGTACTTAATGCTAAGCAAGCTTTTGAATTGGCTAACATCAATTCTGAGTTCTATGAATTGCAACCCAAGGAAGGCCTTGCCCTTGTTAATGGCACGGCTGTCGGTTCTGGCATGGCTTCTATTGTTCTCTTTGAGGCAAATATACTAGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCCGAAGTGATGCAAGGGAAACCTGAGTTTACTGATCATTTGACACACAAGTTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCCATTATGGAGCACATTTTGGATGGAAGTTCCTACATGAAGGATGCTAAGAAGCTGCATGAAATAGATCCGTTGCAGAAGCCAAAACAAGATAGATATGCCCTCAGAACTTCACCACAGTGGCTTGGTCCTCTCATTGAAGTCATTCGTTTCTCCACCAAGTCAATTGAGAGAGAGATCAACTCTGTGAATGACAACCCTCTTATTGATGTTTCAAGGAACAAGGCATTGCATGGTGGTAATTTCCAAGGAACCCCAATTGGAGTCTCCATGGACAACACTCGTTTGGCTCTTGCATCTATCGGCAAACTCATGTTTGCTCAATTCTCCGAGCTTGTCAATGATTTTTACAACAACGGTCTGCCTTCAAATCTCACTGCTAGCAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGCTCTGAACTCCAGTATCTGGCAAATCCAGTAACAAGCCATGTCCAAAGTGCCGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCAGCTAGGAAGACAAATGAATCTATTGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATGGGACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAGCTCGGTCAAGAACACTGTGAGTCAAGTTTCCAAGAGGACTCTTACCACAGGTGGCAACGGAGAACTCCATCCTTCAAGATTTTGCGAAAAGGATCTGCTGAAAGTGGTTGATAGGGAGTATGTATTTTCCTACATAGATGACCCATGCAGTGCTACATACCCACTGATGCAGAAACTTAGGCAAGTGCTTGTAGACCATGCCTTGATAAATGCAGAGAATGAGAAGGATGTTAACACATCAATCTTTCAAAAGATTGCAACCTTTGAGGAGGAGTTGAAGAGCATCTTGCCAAAGGAGGTTGAAAGTACAAGGGCTGCTTATGAGAGTGGGAAAGCTGCAATTCCTAACAAGATAAAAGAATGCAGATCTTACCCACTGTACAAGTTTGTGAGAGAGGAGTTAGGGACTGGGTTGCTAACTGGAGAAAAGGTCAAGTCACCAGGTGAAGAGTTTGACAAATTATTCACAGCAATATGCCAGGGCAAAATTATTGATCCTCTTCTCGAATGCCTTGGAGAGTGGAATGGAGCTCCTCTTCCAATATGTTAA 2238 0.4611 MKCKRGNPQTLQHFLSLSHSLHKTHSLHFIKMEATTLTNAHQNGSFCLSAKTTDPLNWGTAAEALKGSHLDEVKRMVAEYRQPLVHLGGETLTIAQVAAVSGHDQGVRVELSESAREGVKASSEWVMSSMNNGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKQAFELANINSEFYELQPKEGLALVNGTAVGSGMASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNESIEILKLMSSTFLMGLCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPCSATYPLMQKLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKSILPKEVESTRAAYESGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02033 745 FunFam Phenylalanine ammonia-lyase 292 602 - -
Phco2g02033 745 SUPERFAMILY L-aspartase-like 54 745 IPR008948 GO:0003824
Phco2g02033 745 Pfam Aromatic amino acid lyase 92 567 IPR001106 -
Phco2g02033 745 PANTHER HISTIDINE AMMONIA-LYASE 44 745 IPR001106 -
Phco2g02033 745 NCBIfam phenylalanine ammonia-lyase 54 734 IPR005922 GO:0005737|GO:0006559|GO:0016841
Phco2g02033 745 Gene3D Fumarase/aspartase (Central domain) 292 740 - -
Phco2g02033 745 FunFam Phenylalanine ammonia-lyase 558 679 - -
Phco2g02033 745 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 227 243 IPR022313 GO:0016841
Phco2g02033 745 Gene3D - 558 679 IPR023144 -
Phco2g02033 745 Gene3D - 46 291 IPR024083 -
Phco2g02033 745 FunFam Phenylalanine ammonia-lyase 46 291 - -
Phco2g02033 745 CDD PAL-HAL 90 555 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02033 Phco-Chr2 51057300 51060779 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02033 2 51057300 51060779 Phco6g02181 6 42829340 42832812 ECH
Phco2g02033 2 51057300 51060779 Phco2g02033 2 51057300 51060779 ECH