Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02022 ATGGCCCTCGAAACGCTCCTCGTCAAGGTCAAAACCGCCATATCAAACAGCTTCGACTCAGTTCCGCCCAAGCTTCTCAAGAAGAAACCCTCGTTCAAGTCCAAACCAAACGTCGGCGTTTTGGCGTTCGAGATCGCCGGCGTCATGTCCAAACTCCTCCACCTGTGGCACTCGCTCTCCGATGCCACCATCGTCCGCATCCGAAACGACGCTCTCAACCTCGAGGGCGTGAGGAAGATAATCTCCAACGATGAGTCCTTCCTCCTCGGACTCGCCTGCGCCGAGTTCGCCGAGTCGCTCCGTGTCGTGGCGAACTCGGTGACCCGACTTAGCGCGCGCTGCGAGGACCACAACCTGCGCTCCTTCCAGCAGGCCTTCCTCGACTTCGCGGACTCGGGCTGCGACCCAAAAGGGTGGGCCCTCCAGGGCCCAAAAGAAACCGAATCAAAGCTTAAGAAAATGGAGCGTTACGTGACGCTTACGGCAGCCCTCTACCGCGAAATGGAGGAGCTCACGGTTCTGGAAAGTGCCTTCAGAAAAGCTCTGAACCACGCTGACGCCAACAACGTTGGGAGTAAAGACCAGCAAAAACTCTACGAACTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGGATCTCAAAGAAAGATCCCTGTGGAGCAGGAGTTTCGACAACGTTGTCGTGCTCCTTGTAAGGTTTAGTTTCACTGTTTTAGCAAGGATTAAGGTTGTCTTCGGAATCGGTCACCGTATGCCTTGTCTGTCACGTACCTTGTCTACTTCGGCCACAGTTTATCCATCCGATCAAAACCCTAATGATTTTGTTGTTTCTGGGTTATTGGAAGAAAACTCAAAGTTTGATGAAGAGGTGAACGAAGATATGGAAAGTGGGTTTTTTGAGGCCAACTCGAAGCTTCTTAAACCACCGGAGAGCACCTTAGGAGCTTCAGGTTTGGCTTTGCACTATGCAAATTTGATAATAGTGATGGAGAAGATGATAAAGTCACCACACTTGGTTGGGGTAGATGCAAGAGATGATTTATATGGTATGTTGCCGAGGAGTATAAGATGGGGGTTGAGAGGGAGACTAAGAGGGGTGGGGTTTTGTGCTAGTGACCCTGTTCTCGCTGGAGAATGGAGGGACGCTTTGGGAAGGATATTGGGGTGGTTATCACCTTTGGCACACAACATGATCAAATGGCAAAGTGAGAGAAGCTTTGAGCAACACAATTTGGTGGCCAAGACCAATGTATTGCTGTTACAGACTTTGTTCTTCGCCAATAAAGATAAGACTGAGGCTGCCATAACTGAACTTCTGGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGCGCCAATTCTAATGGGCTACTGTTCAAGTTGAATAAACCAGATAATGAGATATGA 1440 0.4938 MALETLLVKVKTAISNSFDSVPPKLLKKKPSFKSKPNVGVLAFEIAGVMSKLLHLWHSLSDATIVRIRNDALNLEGVRKIISNDESFLLGLACAEFAESLRVVANSVTRLSARCEDHNLRSFQQAFLDFADSGCDPKGWALQGPKETESKLKKMERYVTLTAALYREMEELTVLESAFRKALNHADANNVGSKDQQKLYELQQKIFWQKQEVKDLKERSLWSRSFDNVVVLLVRFSFTVLARIKVVFGIGHRMPCLSRTLSTSATVYPSDQNPNDFVVSGLLEENSKFDEEVNEDMESGFFEANSKLLKPPESTLGASGLALHYANLIIVMEKMIKSPHLVGVDARDDLYGMLPRSIRWGLRGRLRGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQHNLVAKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLFKLNKPDNEI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02022 479 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Phco6g02022 479 PANTHER BNAC09G50660D PROTEIN 32 463 - -
Phco6g02022 479 Pfam Protein of unknown function (DUF668) 314 401 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02022 Phco-Chr6 39985749 39987188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02022 6 39985749 39987188 Phco6g02022 6 39985749 39987188 ECH
Phco5g00566 5 5359525 5360946 Phco6g02022 6 39985749 39987188 PCT