Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00566 ATGGCCCTCGAAACCTGGCTCATCAAGGTCAAAACGGCGCTGTCGCATAGCCTCACGAAGAAACCATCGTTTTCCTCGTCGAAGCCAAAACACGTTGCCGTTTTGTCCTTCGAGATCGCGAACGTGATGTCGAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACGCCAACGTCGTTCGCCTCCGAAACGACGCCATCGCGCTCGAAGGCGTGCGCAAGCTCATCTCAAACGACGAGTCTTTTCTTCTAAGCCTCGCCGTGGCCGAGTTCGCCGACTCGCTCAGACTCGTCGCCGACTCGGTCTCCCGACTCAGCAACTACTGCCACGATCCTTCTCTCCGATCCTTCCACCGAATCTTCACCGAGTTCGCCAACTCGGGCCTCGACCCACGCGCGTGGACCCTCACCACCTCCAAAGACATCGAAACCAAACACAGAAAATTGCAACATTACGTGTCTCTCACGGCAACGCTCCACAAAGAAATCGACTCTCTCACGCTCCTCGAAAGCGCGTTTAAAAAAGCGCTTCTCAACGCTGACAACGCCGCCACCGAACACTCTTCCTCTCACAAAAAACTCAGCGATCTTCAGCAGAAGATTTTCTGGCAGAAACAAGAGGTGAAGAACTTGAAGGAACGTTCGTTATGGAACAAAAACTTCGATGGGGTTGTTTTGTTGTTAGCAAGGTTCGTTTTCACTGTGTTAGCACGGATCAAGGTTGTCTTCGGAATCGGACACAGTAGTGTTCCCTTTTTGTCACGTAGTTTGTCTTCCGTTTATCCCTCTGATCACCAAAACCCTATTTCTTCTTGCTCCTTTATTTCTGGACCGTTAAAAAGCTCAAAACTTGGTGAGGAAAACGAGGATTTGGGATATGGGTTTTTTGAGTCTAATTGCAAGGTGTTGAAGTTGAAGGGTGATAGTGATACTCTGGGTGCTTCAGCTTTGGCCTTGCACTATGCAAACTTGGTGATGGTGTTGGAGAAGATGATAAAGTCACCCCAGTTGGTTGGGGTGGATGCTAGGGACGATTTGTATGGGATGCTACCAAGTAGCATAAGGTCATCTTTGAGGGCAAGATTGAGAGGGGTGGGGTTTTCTGCATGTGATGATCATGTGCTTGCTGGAGAATGGAGGGATGCATTGGGCAGGATTCTGGGGTGGTTGGCTCCATTGGCACATTACATGATCAAGTGGCACAGTGAAAGGAGCTATGAGCAGCAGAACTTGGTACCAAAAACCAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAAACAAGGAGAAGACAGAAGCTGCCATCACTGAGCTGCTTGTGGGGTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACAGCTAAGGCATTGTTTGAATGTACCAAATTTAATAATGGTTTCTTAAGCTTGCACAAGCCCAGCTAA 1422 0.4902 MALETWLIKVKTALSHSLTKKPSFSSSKPKHVAVLSFEIANVMSKLLHLWQSLSDANVVRLRNDAIALEGVRKLISNDESFLLSLAVAEFADSLRLVADSVSRLSNYCHDPSLRSFHRIFTEFANSGLDPRAWTLTTSKDIETKHRKLQHYVSLTATLHKEIDSLTLLESAFKKALLNADNAATEHSSSHKKLSDLQQKIFWQKQEVKNLKERSLWNKNFDGVVLLLARFVFTVLARIKVVFGIGHSSVPFLSRSLSSVYPSDHQNPISSCSFISGPLKSSKLGEENEDLGYGFFESNCKVLKLKGDSDTLGASALALHYANLVMVLEKMIKSPQLVGVDARDDLYGMLPSSIRSSLRARLRGVGFSACDDHVLAGEWRDALGRILGWLAPLAHYMIKWHSERSYEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTKFNNGFLSLHKPS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00566 473 Pfam Domain of unknown function (DUF3475) 34 89 IPR021864 GO:0045927
Phco5g00566 473 Pfam Protein of unknown function (DUF668) 310 398 IPR007700 GO:0045927
Phco5g00566 473 Coils Coil 193 213 - -
Phco5g00566 473 PANTHER BNAC09G50660D PROTEIN 18 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00566 Phco-Chr5 5359525 5360946 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00566 5 5359525 5360946 Phco5g00566 5 5359525 5360946 ECH
Phco5g00566 5 5359525 5360946 Phco6g02022 6 39985749 39987188 PCT