Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02012 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTGGCTGAGTTCATATCAGCACTAGCTGCAGGAAACAATGCACAACTGATGGTTGTGGCATGTGCTGGTGCAGCAGACTCCACCACTCTTGCATTGGTTGCTGCTGCTCATCAAACTGGTGGCCAACTCATTTGTGTTGTCCCTGGCCATGAAGAGCTAAGAGCCTCCAAAGCTGCCTTGGGAGTGGCTTCTCATCATGTTCAATTCATGGTAGGAGAAGCTCAGGAGCTTCTGTCAAACCAATATGACCAGGCAGCAGATTTTGTGCTCATTGACTGCAACCTTGAGAACCACGAAGAGATTTTTAAAGCAGTGCAAGAGGGTAGGAAGCAAAATGGCATGGTGGTTGTGGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCTTGGCATGTGGATCAAAAACACAGCTTCTTCCTATAGGAGAAGGTTTGCTAGTGACTAGATTTGGAATCACTGAAACAAGTCCAAAGTATGGAAGCAGAATGGGAAAGGCCAAAAGCCGTTGGGTTGTCAAGGTAGATAAATGCACAGGCGAGGAACATGTGTTCAGAGTTAGATCTCCTCACAGGAAAGTGATCCAAGCGTAA 669 0.4679 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACAGAADSTTLALVAAAHQTGGQLICVVPGHEELRASKAALGVASHHVQFMVGEAQELLSNQYDQAADFVLIDCNLENHEEIFKAVQEGRKQNGMVVVGYNAFSCRKSCLACGSKTQLLPIGEGLLVTRFGITETSPKYGSRMGKAKSRWVVKVDKCTGEEHVFRVRSPHRKVIQA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02012 222 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Phco6g02012 222 PANTHER DUF1442 FAMILY PROTEIN 3 211 IPR009902 -
Phco6g02012 222 Pfam Protein of unknown function (DUF1442) 3 211 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02012 Phco-Chr6 39851298 39852109 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02012 6 39851298 39852109 Phco6g02012 6 39851298 39852109 ECH
Phco5g00553 5 5179576 5180433 Phco6g02012 6 39851298 39852109 PCT