Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00553 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACATTGAAAATGGGTCAAAAGGCCAAAGAGCCAGCTGTTGCAGAGTTCATATCAGCACTAGCTGCTGGCAACAATGCACAACTAATGGTTGTGGCATGTGCTGGTGCAGCAGACTCCACCACACTAGCATTAGTCACTGCTGCACATCAAACTGGTGGCCATGTTGTTTGCATTGTCTCTAGCCATGATGAACTAAAGGCCTCCAAAAAAGTCCTTGGAGTGAATGCCAGTGAAGTCCAATTCATGGTTGGAGAGGCTCAACAGGAACTACTGTTGTTAAGGCAAGCAGATTTTGTGGTCATTGATTGCAACCTTGTGAGCCATGGAGAGATTGTTAAAGCAATCCAAGATGGTGGCATGCAGAATGGTGCAGTGGTTGTTGGCTGCAATGCACTTAGCTGTAGAGGGTCTTGGTGGTCTTGTGGATCAAAAACTCAGTTGTTGCCTATAGGAAAAGGGCTTCTGGTGACAAGATTTGGAGCAAGTGCTGCAAGCCCAAAACATGGATCTGGAGTGAGTAAGACCAAAAGTAGTTGTTGGATTGTTAAGGTAGATAAATGCACTGGTGAAGAACATGTGTACAAGGTCAGAGTTCCACAAGGAAAAGTGATTCAAGCTTAA 666 0.4535 MACWSAENATKAYLNTLKMGQKAKEPAVAEFISALAAGNNAQLMVVACAGAADSTTLALVTAAHQTGGHVVCIVSSHDELKASKKVLGVNASEVQFMVGEAQQELLLLRQADFVVIDCNLVSHGEIVKAIQDGGMQNGAVVVGCNALSCRGSWWSCGSKTQLLPIGKGLLVTRFGASAASPKHGSGVSKTKSSCWIVKVDKCTGEEHVYKVRVPQGKVIQA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00553 221 PANTHER DUF1442 FAMILY PROTEIN 3 210 IPR009902 -
Phco5g00553 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
Phco5g00553 221 Gene3D Vaccinia Virus protein VP39 5 173 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00553 Phco-Chr5 5179576 5180433 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00553 5 5179576 5180433 Phco5g00553 5 5179576 5180433 ECH
Phco5g00553 5 5179576 5180433 Phco6g02012 6 39851298 39852109 PCT