Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02001 ATGGCTTCTCTGGCGGCTTCCACCGTGGCTATGTCAGAAATGCTTGGAAACCCCGTGACCCTCAGAGACGCTACCAGATCTACCCCATCACCATCTACACCTGCTACCTTCAAGACTGTTGCTCTTTTCTCCAAGAAGGCAGCGCCACCTTCTAAGAAAAAGGCTGCTGCTGTGTCCCCCGCCAACGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCAGAGATTCCCGAGTACTTGACAGGAGAAGTGCCTGGAGATTATGGTTATGACCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATACCAGGCGTTTGAGTTGATCCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCCGTTTGGTTCAAGACCGGAGCTTTGCTTCTTGATGGGGGTACGTTGAACTACTTCGGGAAACCTATCCCCATCAATCTTATTGTTGCTGTTGTTGCTGAGATAGTTCTTCTGGGTGGTGCTGAATACTACAGAATTACCAATGGCCTGGATTTCGAAGACAAGCTTCACCCAGGTGGTCCATTCGACCCATTGGGGCTAGCAAAGGATCCAGATCAAGCTGCACTTCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTACTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGTGAAGGTCCGGTTGAGAACTTAGCAAAACATCTTAGTGACCCTTTTGGTAACAACTTGCTCACTGTGCTTGCTGGGTCAGCTGAGAGGGCTCCAACTCTGTAA 861 0.4901 MASLAASTVAMSEMLGNPVTLRDATRSTPSPSTPATFKTVALFSKKAAPPSKKKAAAVSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEIVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLTMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVLAGSAERAPTL 286
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02001 286 SUPERFAMILY Chlorophyll a-b binding protein 67 277 - -
Phco6g02001 286 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 29 275 IPR001344 GO:0009765|GO:0016020
Phco6g02001 286 FunFam Chlorophyll a-b binding protein, chloroplastic 75 286 - -
Phco6g02001 286 Pfam Chlorophyll A-B binding protein 88 249 IPR022796 -
Phco6g02001 286 Gene3D Chlorophyll a/b binding protein domain 75 286 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco6g02001 Phco-Chr6 39664338 39666550 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02001 6 39664338 39666550 Phco6g02001 6 39664338 39666550 ECH
Phco5g00551 5 5149392 5151559 Phco6g02001 6 39664338 39666550 PCT