Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00551 ATGGCTTCCCTTGCAGCTTCCACTGCTGCTGCATCCCTTGGCATGTCAGAAATGCTTGGAAACCCCATCAACCTCAATGGTGCCACAAGACCTGCTCCATCTCCCTCTAGCCCTGCCTCCTTCAAGACTGTGGCTCTTTTCTCCAAAAAGAAGGCAGCACCAAAAAAAGCTGCTGTTGTCTCTCCTGCCAATGATGAGCTTGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCGAGGTCCCCGAGTACTTGAATGGAGAAGTCCCCGGAGATTATGGTTATGACCCCTTCGGTCTCGGCAAGAAGCCAGAGGACTTCGCCAAATATCAGGCATTTGAGTTGATTCACGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCAAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACAGGAGCTCTGCTTCTTGATGGGGGTACGTTGAACTACTTTGGGAAACCCATTCCCATCAATCTTATTGTGGCTGTCGTTGCTGAGATAGTTCTTGTGGGAGGTGCAGAGTACTACAGAATTATTAATGGCCTGAATTTGGAAGACAAACTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTTGCAAACGATCCAGATCAGGCTGCACTGCTAAAGGTGAAGGAAATCAAGAATGGTAGACTTGCTATGTTTTCCATGCTTGGTTTCTTCTTGCAAGCCTATGTCACTGGAGAAGGTCCTGTTGAGAACCTTGCAAAGCATCTCAGTGACCCATTTGGCAACAACTTGCTCACAGTCATTGCTGGGACAGCTGAGAGAACTCCAACTCTCTAA 867 0.489 MASLAASTAAASLGMSEMLGNPINLNGATRPAPSPSSPASFKTVALFSKKKAAPKKAAVVSPANDELAKWYGPDRRIFLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEIVLVGGAEYYRIINGLNLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFSMLGFFLQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERTPTL 288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00551 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 35 277 IPR001344 GO:0009765|GO:0016020
Phco5g00551 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
Phco5g00551 288 SUPERFAMILY Chlorophyll a-b binding protein 69 279 - -
Phco5g00551 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Phco5g00551 288 FunFam Chlorophyll a-b binding protein, chloroplastic 77 288 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco5g00551 Phco-Chr5 5149392 5151559 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00551 5 5149392 5151559 Phco5g00551 5 5149392 5151559 ECH
Phco5g00551 5 5149392 5151559 Phco6g02001 6 39664338 39666550 PCT