Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01993 ATGGTAGAACTTTCTTCATTTCTCTACGCTAAAACACTTCCATTTCACTCTGTACCATCCATATGTACCAAAGTCCAACAAGTCTCTACTATTAACCATCATTGTCTGCTTCTATTCCCCTTATTAATACTGGAAATGAGGCTACAACAACTCATTTTGTTCCTGTTGTTGCTCTTTGTTGCCAAAGCAAACGGGTCTCTACTACCATTCATAGATCCTCCCAGAGGCATTTTGGCTGAGCTCTTGTCGGATCGCTTCCCAGACCCGTTTCATGTGCTGGAACAAATTCCATTTGGGGTTGACAAAGATGAACAATCCATGGTCATGTCACCTGCTAGAGTGGACTGGAAGGAGACCCCAGAGGGGCATGTAATGATGCTGGATGTGCCGGGGATGAAGAGAGAAGAGATAAAGATAGAAGTGGAAGAGAATAGGGTGCTGAGAGTGAGTGGTGAAAGGAAGAGAGAGGAGGAGAAGAAAGGGGATCACTGGCACAGAGTGGAGAGGTCCTATGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGACAGTGTGAAGGCTAAGCTGGAGAATGGGGTGCTCACTTTGACTCTTGACAAGTTGTCACCTGAAAAGATCAAAGGTCCCAGGGTGGTCAGCATTGCAGGGGAGGATCAGCAGCCAGCCAAGCTGAGCACAGATGGGGCCAAGCAAGAGCTCTGA 714 0.4748 MVELSSFLYAKTLPFHSVPSICTKVQQVSTINHHCLLLFPLLILEMRLQQLILFLLLLFVAKANGSLLPFIDPPRGILAELLSDRFPDPFHVLEQIPFGVDKDEQSMVMSPARVDWKETPEGHVMMLDVPGMKREEIKIEVEENRVLRVSGERKREEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGEDQQPAKLSTDGAKQEL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01993 237 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 103 221 IPR002068 -
Phco6g01993 237 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 102 216 IPR031107 -
Phco6g01993 237 MobiDBLite consensus disorder prediction 216 237 - -
Phco6g01993 237 FunFam 22.0 kDa heat shock protein 75 218 - -
Phco6g01993 237 ProSiteProfiles CS domain profile. 109 216 IPR007052 -
Phco6g01993 237 CDD ACD_ScHsp26_like 113 204 - -
Phco6g01993 237 Pfam Hsp20/alpha crystallin family 115 218 IPR002068 -
Phco6g01993 237 Gene3D - 77 220 IPR008978 -
Phco6g01993 237 SUPERFAMILY HSP20-like chaperones 106 215 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01993 Phco-Chr6 39571848 39572677 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00535 5 4975358 4975915 Phco6g01993 6 39571848 39572677 PCT