Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00535 ATGAGGCACTTAGTACTGGTACCACTGATCTTGCTTGTTCTTGTTGGTTTTCCATCGGCAAAAGGGTATCTGCAACCATTTACGGATCGTCCTGGTGCACTCTGGGCTGACATATGGTCTGATCGTTTCCTTGATCCATTTCGTGTGTTAGAGCAAATCCCATTTGGGGTTCCCAAAGATCAGCCATCCATGGCTGTGTCACCTGCACGAGTAGATTGGAAGGAGACACCGGAGGGACATGTTATAATGATAGATGTGCCAGGGTTGAAGAAAGATGAGATCAAGATAGAAGTGGAGGGGAACAGAGTGCTGAGAGTGAGTGGAGAGAGGAAGATGGAGGAGGAGAGGGAAGGGGATCACTGGCACAGAGTGGAGAGATCTTATGGCAAATTCTGGAGGCAGTTCAAGGTACCAGACAATGTGGATTTTGATTCTCTCAAGGCTAAGTTAGAGAATGGAGTGCTTACTCTCACAATGGCCAAATTGTCACCTGATAAGATCAAAGTTCCAAGGGTGGTTAGCATTGCAGGGGATGATGAAAGCAAGCAGGTGCTTTGA 558 0.4713 MRHLVLVPLILLVLVGFPSAKGYLQPFTDRPGALWADIWSDRFLDPFRVLEQIPFGVPKDQPSMAVSPARVDWKETPEGHVIMIDVPGLKKDEIKIEVEGNRVLRVSGERKMEEEREGDHWHRVERSYGKFWRQFKVPDNVDFDSLKAKLENGVLTLTMAKLSPDKIKVPRVVSIAGDDESKQVL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00535 185 CDD ACD_ScHsp26_like 70 161 - -
Phco5g00535 185 FunFam 22.0 kDa heat shock protein 32 175 - -
Phco5g00535 185 ProSiteProfiles CS domain profile. 66 173 IPR007052 -
Phco5g00535 185 SUPERFAMILY HSP20-like chaperones 59 172 IPR008978 -
Phco5g00535 185 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 60 178 IPR002068 -
Phco5g00535 185 Pfam Hsp20/alpha crystallin family 72 175 IPR002068 -
Phco5g00535 185 Gene3D - 32 175 IPR008978 -
Phco5g00535 185 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 60 169 IPR031107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00535 Phco-Chr5 4975358 4975915 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00535 5 4975358 4975915 Phco5g00535 5 4975358 4975915 ECH
Phco5g00535 5 4975358 4975915 Phco6g01993 6 39571848 39572677 PCT