Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01558 ATGGCCAAGGGCGATAAAAAACCGGCAGAGAAAAAGCCCGCGGAGAAGGCTCCGGCGGAGAAAACAAAGGCAGAGAAGAAGATCCCAAAGGATGCTACCTCCGGCGACAAGAAGAAGAAGAGAAAGGCCAAGAGTGTGGAGACCTACAAGATCTATATCTTCAAGGTTCTCAAACAGGTGCACCCTGACATAGGGATCTCCAGCAAGGCAATGGGGATCATGAACAGCTTCATCAACGACATCTTTGAGAAGCTCGCTCAGGAGTCATCCAGACTCGCCCGTTACAACAAGAAACCTACTATCACATCCCGCGAGATCCAGACCGCTGTTCGTCTTGTCCTCCCAGGAGAACTCGCTAAGCACGCCGTTTCGGAAGGCACCAAGGCCGTCACCAAGTTTACCAGTTCTTAA 411 0.5134 MAKGDKKPAEKKPAEKAPAEKTKAEKKIPKDATSGDKKKKRKAKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01558 136 Gene3D Histone, subunit A 6 136 IPR009072 GO:0046982
Phco6g01558 136 SMART h2b3 39 135 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 Pfam Core histone H2A/H2B/H3/H4 7 112 IPR007125 GO:0003677
Phco6g01558 136 ProSitePatterns Histone H2B signature. 104 126 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 PRINTS Histone H2B signature 68 88 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 PRINTS Histone H2B signature 120 133 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 PRINTS Histone H2B signature 90 107 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 PRINTS Histone H2B signature 49 67 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 PRINTS Histone H2B signature 107 120 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 MobiDBLite consensus disorder prediction 1 44 - -
Phco6g01558 136 FunFam Histone H2B 5 136 - -
Phco6g01558 136 PANTHER HISTONE H2B 23 135 IPR000558 GO:0000786|GO:0003677|GO:0030527
Phco6g01558 136 SUPERFAMILY Histone-fold 23 136 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01558 Phco-Chr6 16851059 16851469 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01430 2 43586992 43597207 Phco6g01558 6 16851059 16851469 ECH
Phco6g01558 6 16851059 16851469 Phco6g01558 6 16851059 16851469 ECH