Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01515 ATGTTGAGGACGTTAGAGAGGCCGCAGCAGCTTTTGCTTTATAAAAATCAGAGATTGAACATCAAAAGAGCACACACTCTTCTCACTTTGAACTGCAGGTGCCTGTTTGGTCGTTGTGTTGTGTTGTGTTGTGTTGGGTGGGGTGGGGTGCTTTCACATTGTCTCTTCAAAATGACTTTCTCCCTTTCCCTCACCATTCTCCTTTCCCTTCTCTCTGTTCTTCTGCTACATGCCAATGCCCTCCCACTACATTATAATCACCCCATTCACCATCGCCACCCTCGCTTTGCCACCCATAACTACAGAGATGCTCTCACCAAATCCATTCTCTTCTTTGAAGGCCAGAGGTCAGGGAAGCTCCCTCCTAACCAGAGAATGTCTTGGAGGAGGGACTCTGGCCTTTCTGATGGCGCAGCCATGCGTGTTGATTTGGTTGGAGGGTACTATGATGCTGGGGACAATGTCAAATTTGGCTTCCCCATGGCCTTCACCACCACCATGCTCTCATGGAGCGTTATTGAGTTTGGAGGACTTATGAAAGGTGAGTTGCAGAATGCTAGAGTGGCCATTCGCTGGGCCACCGATTATCTTCTCAAAGCTACTGCACATCCCAACACCATTTATGTTCAGGTGGGGGATGCTAAGAAGGACCATGCTTGTTGGGAGAGACCAGAGGACATGGACACTCCAAGAAGTGTGTTTAAAATAGATGCCAACACACCTGGTTCAGAAGTTGCCGCGGAAACTGCTGCAGCTCTTGCAGCTGCTTCTCTGGTTTTTAGAAGAACTGACCCCACATACTCAAAAGCTTTAGTGAGAAGGGCCATCAGGGTATTCCAGTTTGCTGATAAGTACAGGGGATCCTACAGCAATGCCTTGAAACCCTTTGTGTGCCCCTTCTATTGCTCGTACTCTGGTTATCAGGATGAGCTGTTGTGGGGTGCTGCCTGGCTGCACAAGGCTACCAAGAATCCAATGTACCTAAACTACATTAAAGTTAATGGCCAGATCCTTGGGGCTGCAGAGTTTGACAACACCTTTGGGTGGGATAACAAGCATGCTGGAGCAAGAATACTTCTTTCCAAGGAATTCCTGGTTCGTAGGGTACAATCCCTCCATGACTACAAGGGCCATGCGGACAATTTCGTTTGTTCTCTAATTCCTGGGACCTCTTTCTCTTCTACACAATATACCCCAGGTGGGCTTCTTTTCAAGATGAGTGATAGCAATATGCAGTATGTCACTTCCACCTCCTTCCTACTGTTAACATATGCCAAATACTTGACCTCAGCCCATACGGTTGTTAACTGTGGTGGAATCGCAGTAACCCCGAAGAGGCTCCGGACAATAGCAAAGAAACAGGTGGATTACTTGCTTGGAGACAACCCCTTAAAGATGTCATACATGGTGGGGTATGGTCCAAGGTACCCAAGAAGGATACACCACAGGGGCTCATCTCTACCGTCCATTGCTGTACACCCTGGAAAGATCCAATGTTCTGCTGGCTTCAGTGTGATGAATTCACAATCCCCGAACCCAAACATTCTAGTGGGGGCTATTGTTGGTGGACCGGACCAACATGATAGGTTCCCAGATGAACGGTCGGATTATGAGCAATCAGAGCCAGCAACATACATTAACTCACCCCTTGTAGGAGCACTGGCGTATCTTGCTCACTCATTTGGTCAACTCTAG 1695 0.4796 MLRTLERPQQLLLYKNQRLNIKRAHTLLTLNCRCLFGRCVVLCCVGWGGVLSHCLFKMTFSLSLTILLSLLSVLLLHANALPLHYNHPIHHRHPRFATHNYRDALTKSILFFEGQRSGKLPPNQRMSWRRDSGLSDGAAMRVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELQNARVAIRWATDYLLKATAHPNTIYVQVGDAKKDHACWERPEDMDTPRSVFKIDANTPGSEVAAETAAALAAASLVFRRTDPTYSKALVRRAIRVFQFADKYRGSYSNALKPFVCPFYCSYSGYQDELLWGAAWLHKATKNPMYLNYIKVNGQILGAAEFDNTFGWDNKHAGARILLSKEFLVRRVQSLHDYKGHADNFVCSLIPGTSFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHTVVNCGGIAVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSIAVHPGKIQCSAGFSVMNSQSPNPNILVGAIVGGPDQHDRFPDERSDYEQSEPATYINSPLVGALAYLAHSFGQL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01515 564 PANTHER ENDO-1,4-BETA-GLUCANASE 73 559 - -
Phco6g01515 564 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 530 548 IPR033126 -
Phco6g01515 564 Gene3D - 96 564 IPR012341 GO:0005975
Phco6g01515 564 SUPERFAMILY Six-hairpin glycosidases 98 562 IPR008928 GO:0005975
Phco6g01515 564 FunFam Endoglucanase 97 562 - -
Phco6g01515 564 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 457 483 IPR018221 -
Phco6g01515 564 Pfam Glycosyl hydrolase family 9 101 554 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01515 Phco-Chr6 16059378 16064624 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01515 6 16059378 16064624 Phco6g01515 6 16059378 16064624 ECH
Phco2g02401 2 54221330 54223488 Phco6g01515 6 16059378 16064624 PCT