Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01434 ATGGTTGCGCCTTGTCCAACTTCCATGATGGTAAGAACCAAGAAAACAAAGGCTATGGGATTTCCGACGATTGACCTTTCATTGGAAAGGTCGAAGCTGTCGGAACTAGTGGTGAAAGCATGTGAAGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGGCAAAGGAGGTAATTTCAAGGTTAGAAGAGGAGGGAACGGAGTTTTTCTCCAAAACCTCCTCAGAGAAGCGTCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGCTGCAGAAATATTGGCCCCAATGGCGATATGGGTCACCTCGAGTATCTCCTCCTTCATACCAATCCTCTTTCCGTATCTGAGAGATCCCAAACCATAGCCAACGACCCTACCAAGTTCAGTTGCGCCGTGAATGATTATATAGAAGCAGCTAAAGGACTAACATGTGAGATTCTGGATCTTGTGGCGGAGGGTTTGTGGGTCCAAGACAAGTTCTCACTCAGCAGCCTCATCAAAGACGTCCATAGTGACTCACTCCTCAGGATCAATCAGTACCCTCCCGTGAGCCTAAAGAGCAACAAGAATTGCAACACGTCCAAACTTGAGCCACATCAACTCCAGAACCAAAATAATAATAATAATAGTAACAGTAACCACAACAACCACAACATTGGCTTTGGAGAGCATTCTGACCCTCAGATCTTGACCATCATGCGATCCAACAACGTGGATGGTCTTCAGATTTCCACCCACGATGGCTTGTGGATTCCTGTCCCCCCTGACCCTAATGAATTCTTCGTTATGGTTGGTGATGCCCTGCAGGTTTTGACAAATGGAAGGTTTATAAGTGTGAGACACAGAGTATTGACCAACACAACAAAGGCCAGAATGTCGATGATGTACTTTGCAGCACCACCGCTGAATTGGTGGATCACTCCACTGCCGAAGATGGTGACATCCCACAATCCAAGTCTGTATAAGCCCTTCACGTGGGCTCAATACAAGCAAGCAGCATACTCTCTACGACTGGGAGACACTCGTCTTGATCTCTTCAAGATCCAACGACAACAAGATACCCATCACACATCTGCTTCTCCCTGA 1086 0.4678 MVAPCPTSMMVRTKKTKAMGFPTIDLSLERSKLSELVVKACEEYGFFKVVNHSVAKEVISRLEEEGTEFFSKTSSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSVSERSQTIANDPTKFSCAVNDYIEAAKGLTCEILDLVAEGLWVQDKFSLSSLIKDVHSDSLLRINQYPPVSLKSNKNCNTSKLEPHQLQNQNNNNNSNSNHNNHNIGFGEHSDPQILTIMRSNNVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFISVRHRVLTNTTKARMSMMYFAAPPLNWWITPLPKMVTSHNPSLYKPFTWAQYKQAAYSLRLGDTRLDLFKIQRQQDTHHTSASP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01434 361 FunFam Gibberellin 2-beta-dioxygenase 2 4 337 - -
Phco6g01434 361 SUPERFAMILY Clavaminate synthase-like 6 340 - -
Phco6g01434 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 22 85 IPR026992 -
Phco6g01434 361 MobiDBLite consensus disorder prediction 188 220 - -
Phco6g01434 361 Pfam 2OG-Fe(II) oxygenase superfamily 208 299 IPR044861 -
Phco6g01434 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 22 332 - -
Phco6g01434 361 Gene3D - 3 337 IPR027443 -
Phco6g01434 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 308 IPR005123 -
Phco6g01434 361 PRINTS Isopenicillin N synthase signature 37 54 - -
Phco6g01434 361 PRINTS Isopenicillin N synthase signature 260 286 - -
Phco6g01434 361 PRINTS Isopenicillin N synthase signature 224 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01434 Phco-Chr6 14619545 14622953 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01434 6 14619545 14622953 Phco6g01434 6 14619545 14622953 ECH
Phco2g02466 2 54705860 54708711 Phco6g01434 6 14619545 14622953 PCT