Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02466 ATGGTTGTTCCTTCTCCAACACCCACAAAGGCAATGAGAATCCCCACCATTGATCTATCCATGGAAAGGTCACAGTTATCGCAAACTGTGGTGAAAGCCTGCGAGGAATACGGTTTCTTCAGAGTGGTTAACCACAATGTGCCGAAGGAGGTTATTGCAAGATTGGAAGAAGAAGGTGCAGAGTTTTTCTCAAAACCCAGCCACCAGAAGCGTCGGGCTGGGCCCGCAAGCCCTTTCGGTTACGGCTTCACCAACATTGGGCCCAATGGAGATATGGGTGACCTCGAGTATCTTCTACTTCATGCTAACCCTCTCTCCATAGCCCAGAGATCCAAAACCATCGCTAACGACTCCACCAAGTTCAGTGTTGTTGTGAAGGAATACGTGGAAGTAGTAAAAGAAGTAACGTGCGATATTCTAGATCTGGTGGTTGAGGGGTTGGGGGTCCCAGACAAGTTTGCTCTTAGCAGTCTCATCAGAGATTTTCACAGCGATTCTGTTCTGAGGATCAATCACTACCCTCCATTGAAGGGGAAGTCGAAGGGTAACAAGAATAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATGTTGACCATCATGCGATCCAACGATGTGGGTGGCCTTCAGATTTACACCCGTGAGGGGCTGTGGCTTCCTGTCCCTCCTGACCCCACCAATTTCTTTGTCATGGTTGGCGATGTCTTGCAGGTTATGACAAATGGAAAGTTCATGAGCGTGAGGCACAGGGCATTGACCAACACATTGGAGGCAAGGATGTCAATGATGTACTTTGCAGCACCACCACTTGATTGGTGGATTGCTCCTCTACCAGAGATGCTGTCACCGCCACAGATTCAAAGTTTATATAAGCCCTTCACATGGGCCCAGTACAAGCAAGCAACATATTCTTCACGCCTTGGAGATTCCCGACTTGATCTCTTCAAGGCCCAGCTAGATACCCATCTTCTGTCTTCCTCTCCATCACAGTTTCAATGTTGA 1002 0.485 MVVPSPTPTKAMRIPTIDLSMERSQLSQTVVKACEEYGFFRVVNHNVPKEVIARLEEEGAEFFSKPSHQKRRAGPASPFGYGFTNIGPNGDMGDLEYLLLHANPLSIAQRSKTIANDSTKFSVVVKEYVEVVKEVTCDILDLVVEGLGVPDKFALSSLIRDFHSDSVLRINHYPPLKGKSKGNKNSIGFGAHSDPQMLTIMRSNDVGGLQIYTREGLWLPVPPDPTNFFVMVGDVLQVMTNGKFMSVRHRALTNTLEARMSMMYFAAPPLDWWIAPLPEMLSPPQIQSLYKPFTWAQYKQATYSSRLGDSRLDLFKAQLDTHLLSSSPSQFQC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02466 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 268 IPR005123 -
Phco2g02466 333 Gene3D - 3 308 IPR027443 -
Phco2g02466 333 Pfam 2OG-Fe(II) oxygenase superfamily 165 267 IPR044861 -
Phco2g02466 333 SUPERFAMILY Clavaminate synthase-like 4 309 - -
Phco2g02466 333 Pfam non-haem dioxygenase in morphine synthesis N-terminal 14 87 IPR026992 -
Phco2g02466 333 FunFam Gibberellin 2-beta-dioxygenase 2 2 306 - -
Phco2g02466 333 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02466 Phco-Chr2 54705860 54708711 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02466 2 54705860 54708711 Phco2g02466 2 54705860 54708711 ECH
Phco2g02466 2 54705860 54708711 Phco6g01434 6 14619545 14622953 PCT