Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01431 ATGGTTTCCAAAACCCCCTCCCAACTCATTGTTCTACTTGTTTTTCTTGTTTCTTCGTTAAACATTACTTCCAGCTCCTACACACATAGTGTGGCCAATTTTGACAAGTGGGTATCTTGCAACGTGAAGAAGAATGATGAGAGAAAGAGCATTTTGAAAAGCAAATGGAAGGTGGCTGCTCTTGGTCCAGATTTGAAGCTGAGGCAGGCTGAGAGTAACAAAGTTATAATAACAGTTAGCCAAGACGGTTCTGCTGACTTCAACACCATTTCAGAAGCTCTCAATAGCATTCCACCAAGTAACACTAGGAGAGTTATAGTCTCCATTTCGCCGGGTATTTATAGGGAGAAGGTGATGATCCCAAGAATAATGCCTTTTATTACATTGTCAGGGGAGGCTGGGAATCCACCAACCATTACTGGAAATGATACATCTGCCTCCAAAAGAAATGGCATTCCCTTAGGGACGTTCCATAGTGCAACAGTTGCTGTGGATGCTAGCTACTTTGTGGCCATCAACCTCAAATTTGAGAACAGTGCTCCACATGTGATTGGAAGGAGGGGAGAACAAGGCGTGGCGCTTCGGATCTCAGGAACCAAAGCTGCTTTTTACAATTGCGCTTTCAGTGGAGCTCAAGACACTCTCTATGATCACAAAGGCCTTCATTTCTTCAACAACTGCTCCATTCAAGGTTCTGTGGATTTCATCTTTGGTTCTGCCAGGTCCCTTTACCAGAATTGCTATCTAAATTCCACAACTAAGAAGGTGGCTTCCATCACGGCTCAAAAGCGTACAAATTCGTCACTGGATAGTGGATTCTCCTTCAAAAACTGCACAGTAACTGGTAGTGGGCAGGTTTATCTGGGAAGAGCATGGGGAGATTATTCCAGAGTTGTTTTCTCTTACACCTACATGGACAACCTAGTACTCCCCAAAGGATGGAGTGATTGGGGTGACCAAAAGCGTGATTCGAGGGTATATTATGGAGAATACATGTGTAGTGGACCAGGAGCTAACTTGGCTGGAAGAGTGCCATGGGCACGGGTGCTCACGGATGAAGAGGCCAAGCCTTTTATTGGGACCCAATTCATTGAAGGGGACACTTGGCTCATTAGCCCCTAA 1122 0.4501 MVSKTPSQLIVLLVFLVSSLNITSSSYTHSVANFDKWVSCNVKKNDERKSILKSKWKVAALGPDLKLRQAESNKVIITVSQDGSADFNTISEALNSIPPSNTRRVIVSISPGIYREKVMIPRIMPFITLSGEAGNPPTITGNDTSASKRNGIPLGTFHSATVAVDASYFVAINLKFENSAPHVIGRRGEQGVALRISGTKAAFYNCAFSGAQDTLYDHKGLHFFNNCSIQGSVDFIFGSARSLYQNCYLNSTTKKVASITAQKRTNSSLDSGFSFKNCTVTGSGQVYLGRAWGDYSRVVFSYTYMDNLVLPKGWSDWGDQKRDSRVYYGEYMCSGPGANLAGRVPWARVLTDEEAKPFIGTQFIEGDTWLISP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01431 373 ProSitePatterns Pectinesterase signature 2. 229 238 IPR033131 -
Phco6g01431 373 SUPERFAMILY Pectin lyase-like 75 370 IPR011050 -
Phco6g01431 373 FunFam Pectinesterase 72 372 - -
Phco6g01431 373 Gene3D - 71 372 IPR012334 -
Phco6g01431 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 66 370 - -
Phco6g01431 373 Pfam Pectinesterase 77 367 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01431 Phco-Chr6 14592695 14597813 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01431 6 14592695 14597813 Phco6g01431 6 14592695 14597813 ECH
Phco2g02096 2 51753051 51757465 Phco6g01431 6 14592695 14597813 PCT