Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02096 ATGGGATTCAACAGAAACCTCCTCTGGCTTTCTGGCTCTGTGATTTTTCTCTTTTCTATCTCATTTGTTCTTTATTCCACTTCACCTTCCCCAAGCAATAACACGGCCATTAGTCCTCAAGATAGTTTCAGTTTCCAGCTTGGTATATTAAGCAAGATTATAAAGCTTAGTGGCGCTCAAGACTTGGTATCTCTGATAACAAGTATAGCTAGGAGGAGAGATCATCACCATCATCATCACCGGGGAAGACATAGGGAAAAATGCGATGGGGCCAAGTGGGATTCCAGGCTTATTCAACACTATAACGTGAGTCTTGTTTTCACGGTTGATTTGAAGGGCTGTGCTAACTTCAGTAGCGTTCAAAAAGCTGTTGATGCTGTTCCTGAATCTAGCTCTGATACCACCCTTATCATAATCGATTCTGGTACATACAGGGAGAAGGTAGTTGTGCAAGCCAACAAAACAAACTTAATAATTCAAGGTCAAGGGTATCTGAATACAATCGTTGAATGGAACGACACCGCCAATTCCACCGGCGGAACTTCCTACAGCTACTCATTTGCCATCTTTGCTTCTATGTTCACTGCTTACAACATCAGCTTTAAGAACACGGCTCCTCCACCGTCACCGGGAGTGGTTGGGGCACAAGCAGTGGCACTGAGAGTTACCGGTGATAAAGCAGCTTTCTATGGATGTGGATTTTATGGTGCGCAGGATACACTGAATGATGATGGTGGAAGACATTACTTTAAAGAATGCTTAATCCAAGGATCCATTGATTTCATATTTGGAAATGGCAGATCCCTTTATGAGGATTGTACTATAAACTGTGTAGCAAAAGAAGAGAAGGTTGAGATTAGCGGGTCGATCACTGCTCAAGGGAGGAAATCGATGGATGAAGAAAGTGGGTTTTCCTTTGTGAATTGTAGCATTGTTGGGAGTGGAAGAGTGTGGCTTGGAAGAGCTTGGGGGCCCTATGCCACTGTCATTTTCTCAACTACATACATGTCTGATGTCATAGCACCTGAAGGATGGAATGATTGGAGAGATCCTTCTAGAGACCAGAGCGTGTTCTTTGGGGAGTACCGTTGCCATGGACCTGGAGCAAATTATGAATCTAGAGTCTCTTATGCTAAGCAACTCAGGGATAACGAAGCAAACTCCTACATGGATATTTCCTACATTGATGGAAATGATTGGCTTCTTAGCTATCCTGAAAGCTATGTTAACCCTTCATATATCTAA 1245 0.4305 MGFNRNLLWLSGSVIFLFSISFVLYSTSPSPSNNTAISPQDSFSFQLGILSKIIKLSGAQDLVSLITSIARRRDHHHHHHRGRHREKCDGAKWDSRLIQHYNVSLVFTVDLKGCANFSSVQKAVDAVPESSSDTTLIIIDSGTYREKVVVQANKTNLIIQGQGYLNTIVEWNDTANSTGGTSYSYSFAIFASMFTAYNISFKNTAPPPSPGVVGAQAVALRVTGDKAAFYGCGFYGAQDTLNDDGGRHYFKECLIQGSIDFIFGNGRSLYEDCTINCVAKEEKVEISGSITAQGRKSMDEESGFSFVNCSIVGSGRVWLGRAWGPYATVIFSTTYMSDVIAPEGWNDWRDPSRDQSVFFGEYRCHGPGANYESRVSYAKQLRDNEANSYMDISYIDGNDWLLSYPESYVNPSYI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02096 414 SUPERFAMILY Pectin lyase-like 104 402 IPR011050 -
Phco2g02096 414 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 98 401 - -
Phco2g02096 414 Gene3D - 101 408 IPR012334 -
Phco2g02096 414 ProSitePatterns Pectinesterase signature 2. 255 264 IPR033131 -
Phco2g02096 414 FunFam Pectinesterase 101 406 - -
Phco2g02096 414 Pfam Pectinesterase 109 398 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02096 Phco-Chr2 51753051 51757465 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02096 2 51753051 51757465 Phco6g01431 6 14592695 14597813 PCT