Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01376 ATGGCACTCTCATTCTCCTCTCTGAGTGTCTTTCTCTCCACCTTCTTATTCTGCTTGTCTTTGGGGGCAGAAGCTCGTAGATCACCCGTTTCTTCTGTGGTTAGCGAAGAGCTTTTTGATTCCATTTTCCTACACAAAGACAACGCTGCATGCCCGGCTAAAAACTTCTACACCTATGATTCCTTCACCATGGCATCTAGAAGCTTCCCTCGATTTGGTTCTAGTGGAAGTTTAACCACACGCAAGCGTGAGGTTGCGGCGTTTCTTGCTCAAATTTCGCATGAAACCACAGGTGGGTGGGCTACTGCACCCGATGGACCCTATGCTTGGGGATTGTGCTTCAAAGAAGAAGTTAGTCCTCAGAGTGATTATTGTGATTCCACCAACCAACAATGGCCTTGTTACCCAGGAAAAACTTATAAAGGAAGAGGACCAATTCAACTTTCATGGAACTACAACTATGGAGCAGCAGGGAAGGCCTTGGGATTTGATGGATTGAGAAACCCTGATATAGTGTCAAACAATTCATTGATTGCCTTTAAAACAGCTTTGTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACAATGTGATGATTGGAAAATATGTGGCCACAGAGGCTGACTTAGCAGCTAATAGATCTGCAGGGTATGGCCTAGTGACTAACATAATCAATGGTGGACTTGAATGTGGAATTCCTGGTGATTCAAGGGTGAATAACCGTATTGAATACTTCAAAAGATATGCAACATTGTTTAATGTAGATACAGGACCTAACTTGGATTGTGCATATCAAAACTCCTTTCAAACTGTTTCTTAA 828 0.43 MALSFSSLSVFLSTFLFCLSLGAEARRSPVSSVVSEELFDSIFLHKDNAACPAKNFYTYDSFTMASRSFPRFGSSGSLTTRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSTNQQWPCYPGKTYKGRGPIQLSWNYNYGAAGKALGFDGLRNPDIVSNNSLIAFKTALWFWMTEQKPKPSCHNVMIGKYVATEADLAANRSAGYGLVTNIINGGLECGIPGDSRVNNRIEYFKRYATLFNVDTGPNLDCAYQNSFQTVS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01376 275 SUPERFAMILY Lysozyme-like 30 271 IPR023346 -
Phco6g01376 275 CDD chitinase_GH19 34 265 - -
Phco6g01376 275 PANTHER CHITINASE-RELATED 26 268 - -
Phco6g01376 275 ProSitePatterns Chitinases family 19 signature 2. 178 188 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco6g01376 275 Gene3D - 37 271 - -
Phco6g01376 275 Pfam Chitinase class I 33 265 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco6g01376 275 Gene3D Endochitinase, domain 2 116 174 - -
Phco6g01376 275 PIRSF Endochitinase 6 272 IPR016283 GO:0004568|GO:0005975
Phco6g01376 275 FunFam Endochitinase (Chitinase) 116 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01376 Phco-Chr6 13881856 13883061 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01376 6 13881856 13883061 Phco6g01376 6 13881856 13883061 ECH
Phco2g02507 2 54999683 55000811 Phco6g01376 6 13881856 13883061 PCT