Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02507 ATGACATCTTCATTCTCTCCCATTCTTCCCTTCTTCTCCACCTTATTATTTTTCTCTTTTGCTCTTCTCTTCTCTGCACCTTTTGTAGCTGAAGCTTGGTCCAAGCCCCACATACCCATCTCTTCTCTCATCACCAAAACTCTTTTTGACTCCTTTTTCCTTCACAAAGATGACACTGCATGCCCTGCCAAAGACTTCTACACCTACAACTCCTTCATTCGTGCATCAAAATCCTTCCCTGCATTTGGTACCACCGGTTGTTTAGCCACGCGCAAGCGTGAGGTTGCTGCGTTTCTGGCTCAGATTTCCCATGAAACCACTGGTGGGTGGGCCACTGCACCTGATGGTCCATTTGCTTGGGGCTTGTGCTTCAAGGAGGAAATTAGTCCTCAGACTAATTACTGTGATTCTACTAACACCCAATGGCCTTGCTTCCCAGGCAAAAGTTACAAGGGAAGAGGACCAATTCAACTTTCTTGGAACTACAACTATGGACCAGCAGGGAAGGCGTTGGGATTTGATGGGCTGAGGAACCCAGAGATTGTGGCGAACAATTCTGTGATAGCCTTCAAAACTGGTCTGTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACGACGTTATGGTTGGGAAATACGTGGCTACAGAAGCTGACATAGCAGCGAATCGAACATCTGGTTTTGGCTTGGTCACTAACATAATCAATGGTGCACTGGAATGTGGGATTCCTGGTGATGCAAGAGTCAATGATCGGATTGGGTTTTTCGAAAGATATACAAAGTTGCTCAACGTGGACACTGGACCTAACTTGGACTGTGCATATCAGGAACACTTCTAA 846 0.461 MTSSFSPILPFFSTLLFFSFALLFSAPFVAEAWSKPHIPISSLITKTLFDSFFLHKDDTACPAKDFYTYNSFIRASKSFPAFGTTGCLATRKREVAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQTNYCDSTNTQWPCFPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSVIAFKTGLWFWMTEQKPKPSCHDVMVGKYVATEADIAANRTSGFGLVTNIINGALECGIPGDARVNDRIGFFERYTKLLNVDTGPNLDCAYQEHF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02507 281 Pfam Chitinase class I 43 275 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco2g02507 281 CDD chitinase_GH19 44 275 - -
Phco2g02507 281 ProSitePatterns Chitinases family 19 signature 2. 188 198 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco2g02507 281 SUPERFAMILY Lysozyme-like 40 281 IPR023346 -
Phco2g02507 281 PIRSF Endochitinase 24 281 IPR016283 GO:0004568|GO:0005975
Phco2g02507 281 PANTHER CHITINASE-RELATED 39 279 - -
Phco2g02507 281 ProSitePatterns Chitinases family 19 signature 1. 61 83 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco2g02507 281 Gene3D Endochitinase, domain 2 126 184 - -
Phco2g02507 281 Gene3D - 47 281 - -
Phco2g02507 281 FunFam Endochitinase (Chitinase) 126 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02507 Phco-Chr2 54999683 55000811 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02507 2 54999683 55000811 Phco6g01376 6 13881856 13883061 PCT