Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01368 ATGATGACAATGAAGCTGCTTTTGGTAGCCGTTGAACTTGCATGCTTAGTTTATGGGATCTTCTCCTTTGGATCTGAGACACTGTCTCAGCTTTCTTTCTTAGAAAATGGTGTCGTTTCAACTCGCCCTTCTTCATCTCAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGGAGCTCATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTGTTCATTTGGAGGGGGGAGGATGGTGTAATACCATCAGAAATTGTGTCTATAGAAAAAATACTCGTCGTGGTTCCTCAAAATTCATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAATTGGAACAGAGTTAAGTTACGGTATTGTGATGGGGCGTCTTTCAGTGGAGATGGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCGAAAGGAATGCAAAAGGCCAACCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCAGGAGCTTATTTCCAGAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTCTTTCTTGATGCAATTGATGTATCTGGGGGACGCACACTGAGGAATCTGTTTGGAGGTGTGGTTCAGTTACAGGATGTACAAAAAAATCTTCCAAAAAGTTGTCTCGACCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATCGAACATATTGAAACCCCGTTGTTTCTACTCAACACAGCTTACGATGTGTGGCAGGTCCAAGCCAGTTTAGCACCACCTTCTGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCCAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTAAAGACTTCTCAAGGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATTGAGGACAAGCCTATTGCAGTAGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAGCAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1257 0.4272 MMTMKLLLVAVELACLVYGIFSFGSETLSQLSFLENGVVSTRPSSSQPQPLMVDLTLIQGAHSKGAVCLDGTLPGYHLDRGFGSGADSWLVHLEGGGWCNTIRNCVYRKNTRRGSSKFMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDGEDESAQLQFRGQKIWLAAMEELMSKGMQKANQALLSGCSAGGLASIIHCDEFRSLFPESSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMIEHIETPLFLLNTAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQIQFLQDFRNQMLSDIKDFSRSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDSSCHNLVFNFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01368 418 PANTHER NOTUM-RELATED 16 412 IPR004963 GO:0016787
Phco6g01368 418 Pfam Pectinacetylesterase 46 396 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01368 Phco-Chr6 13780484 13787386 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02537 2 55259970 55263656 Phco6g01368 6 13780484 13787386 ECH
Phco6g01368 6 13780484 13787386 Phco2g02537 2 55259970 55263656 ECH
Phco6g01368 6 13780484 13787386 Phco6g01368 6 13780484 13787386 ECH
Phco8g02025 8 21606522 21611955 Phco6g01368 6 13780484 13787386 ECH
Phco2g02513 2 55064001 55069432 Phco6g01368 6 13780484 13787386 PCT