Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02537 ATGGCTAGAGTTTTCTGGACTGTCATTGCTATAGCACTTGTTTTCAGCAACTGGGTTGATGGGTTCGGAGGTTATTATTATGAACATCAGTTGAATGAAACAGAGTTGTCTTTATTAGAGGCTCATGAAGCTTCCTTATCCTACGCCGGGAGTAATCTTCTGCTGGTAGGACTCACCCTTATCCAAAATGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTACCTGGTTATCATTTGCATCGAGGATATGGATCAGGATCAAATAGGTGGCTTATTAATTTAGAGGGTGGTGGATGGTGTAATAATATTAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAAGAGATCCCTTTTACTGGAATATTGAGTAACAAGGCCGAAGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTGCTGGGGATAGTGAAGATGAGACTGCTGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCTATGGAAGACTTGATGTCAAAGGGAATGCGTTTTGCCGATCAGGCTCTTCTTTCGGGATGCTCCGCGGGTGGCCTGGCTACTATTATTCATTGTGATGAATTTCGTGGTCTCTTTCCAATGACCACAAGAGTGAAATGTCTAAGTGATGCTGGGTTGTTTCTTGATGCGATTGACGTATCTGGTGGGCGTACCCTCAGGAATTTATACGGCGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTGCCTCAAATTTGCACTAATCACCTTGATCCCATCTCGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAAGACCCCGCTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCTGCAGATCCGCATGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCACCGCAAATCCAATATCTGCAAGGATTCAGGAATCACATGCTGAATGTTATTAAGGACTTCGCAAGAGCAAATCAAAATGGCTTGTTTATTAATTCATGTTTTTCTCACTGCCAAACTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTTATTAGGAACAAGGCTATCGCTCTGGCTGTTGGAGATTGGTATTTCGATCGAGCAGGTGTTAAGGTCATTGATTGTCCTTACCCTTGTGACAATACGTGCCATCATCTCATTTTCAGATGA 1260 0.4278 MARVFWTVIAIALVFSNWVDGFGGYYYEHQLNETELSLLEAHEASLSYAGSNLLLVGLTLIQNAAAKGAVCLDGTLPGYHLHRGYGSGSNRWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFAGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFADQALLSGCSAGGLATIIHCDEFRGLFPMTTRVKCLSDAGLFLDAIDVSGGRTLRNLYGGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHDCRLNHAKCTAPQIQYLQGFRNHMLNVIKDFARANQNGLFINSCFSHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDRAGVKVIDCPYPCDNTCHHLIFR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02537 419 Pfam Pectinacetylesterase 54 398 IPR004963 GO:0016787
Phco2g02537 419 PANTHER NOTUM-RELATED 40 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02537 Phco-Chr2 55259970 55263656 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02537 2 55259970 55263656 Phco6g01368 6 13780484 13787386 ECH
Phco2g02537 2 55259970 55263656 Phco2g02537 2 55259970 55263656 ECH
Phco6g01368 6 13780484 13787386 Phco2g02537 2 55259970 55263656 ECH
Phco8g02025 8 21606522 21611955 Phco2g02537 2 55259970 55263656 ECH
Phco2g02537 2 55259970 55263656 Phco6g01344 6 13563089 13567303 PCT