Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01348 ATGAAGGAAAGCAAAGAGTGGAACTTGAAAAGAGCACAAACGAAAAGCAAGGCCCGAATATCTGGCCTCTGGGGCCTTTTGTTCATCCGCCCAGGGCTTTCCAACTACCAACTACTTTGCCTTTTTTTATTTCTTTTCATTTCCATTTTGTTAACTTATTGGCTTCCAAACTATATTATGGTTAACCATACTATGAAGCTTCCCAACTTTGTTCTTCTCGTCACTTCGGCTCTTCTCTTAGCCACCACCGTCTCATCAGATCCTGACCTTCTTCAAGACCTCTGTGTCGCCGATCCTTCCTCAGGTGTGAAAGTGAATGGATTCACCTGCAAAGAAGCATCTAAGGTTAATGCCTCAGATTTCTTCTCCAGCATACTAGCCAAAGCAGGAGCCACCAACAACGCCTTTGGTTCCTTGGTGACTGGAGCCAATGTTGAGAAAGTCCCAGGACTGAACACCCTTGGTGTGTCTCTGTCAAGGATTGACTATGCACCAGATGGCATCAACCCTCCTCACACTCACCCTCGTGCCACTGAGATTGTGTTTGTACTTGAAGGGCAACTAGATGTAGGGTTCATAACCACTGCCAATGTGCTCATATCAAAAACCATTAACAAGGGTGAAATATTTGTGTTTCCAAAAGGCTTGGTTCACTTCCAGAAGAACAATGCCAATGTCCCTGCTGCTGTCATTTCAGCCTTCAATAGCCAACTTCCAGGAACACAGTCCATCGCTACAACCTTGTTTGCTGCCACACCATCACTTCCAGACCATGTCTTGACCAAGACCTTCCAGATTGGAACCAAGGAGGTTCAGAAAATCAAGTCCAGGCTTCAACCTAAAAAGTAA 849 0.4523 MKESKEWNLKRAQTKSKARISGLWGLLFIRPGLSNYQLLCLFLFLFISILLTYWLPNYIMVNHTMKLPNFVLLVTSALLLATTVSSDPDLLQDLCVADPSSGVKVNGFTCKEASKVNASDFFSSILAKAGATNNAFGSLVTGANVEKVPGLNTLGVSLSRIDYAPDGINPPHTHPRATEIVFVLEGQLDVGFITTANVLISKTINKGEIFVFPKGLVHFQKNNANVPAAVISAFNSQLPGTQSIATTLFAATPSLPDHVLTKTFQIGTKEVQKIKSRLQPKK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01348 282 FunFam germin-like protein subfamily 2 member 1 86 280 - -
Phco6g01348 282 SMART Cupin_1_3 123 272 IPR006045 -
Phco6g01348 282 ProSitePatterns Germin family signature. 167 180 IPR019780 GO:0030145
Phco6g01348 282 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 82 276 - -
Phco6g01348 282 CDD cupin_OxOx 87 278 IPR001929 GO:0030145
Phco6g01348 282 PRINTS Germin signature 172 192 IPR001929 GO:0030145
Phco6g01348 282 PRINTS Germin signature 202 222 IPR001929 GO:0030145
Phco6g01348 282 PRINTS Germin signature 235 250 IPR001929 GO:0030145
Phco6g01348 282 SUPERFAMILY RmlC-like cupins 117 279 IPR011051 -
Phco6g01348 282 Gene3D Jelly Rolls 86 280 IPR014710 -
Phco6g01348 282 Pfam Cupin 127 272 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01348 Phco-Chr6 13630901 13632762 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02533 2 55241117 55242310 Phco6g01348 6 13630901 13632762 PCT