Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01326 ATGGCTTCCACCGAACACCAAAACGGCGACGCGGTTTCCCATTCCCACAAGAAGCTAAAACCCAGTAATTTCATCACCCACGCCGAGATCCAGTCAGAATTCTCCCACCATGACCCCGCCGTGGCGCGCCTCAACAACGGTGCCTTCGGCTGCTGCCCAGCCTCCGTCATCGCCGTGCAGCGCGACTGGCAGCTCAAGAACCTGCGCCAGCCGGACCGATTCTACTTCAACCACCTCAAGAGCGGCCTTCTCCGCTCCCGAACCATCATTAAGGACCTGGTCAACGCCCACCACGTGGACGAGATCTCCCTCGTCGACAACGCCTCCACCGCCACCGCCATCGTCCTCCAACAGGCCGCATGGGCCTTCCACGACGGAACCTTCCAGAAGGGCGATGTCGTCCTCATGCTGCACTACGCCTACGGAGCCGTCAAGAAAGCCATCGAGGCCTACGTGGTGCGAGCCGGCGGCTCCGTCGTCGAGGTCCCCCTCCGCTTCCCAGTAACCTCCAACGACGAAATCATCCGCGAGTTTCGCAAGGCCATTGAGAAAGGAAAGTCCCAAGGTAACAGAATCCGCTTGGCGGTTATCGACCACGTGACTTCCATGCCCAGCATGGTCATTCCCGTTAAGGAGTTAGTTACGATCTGCAGGGAGGAGGCGGTAGACCAGGTTTACGTCGACGCGGCGCACGCGGTTGGGTGCACGCGCGTGGATATGCAGGAGATTGGCGCGGATTTCTACACGAGCAATTTGCACAAGTGGTTCTTCTGCCCTCCTTCCGTGGCGTTCCTCTACGCACGTGCGTCGCCGAAGTCACGTGACCTGCACCATCCCGTGGTGTCTCACGAATACGGGAATGGGTTAGCGGTGGAGAGTTCTTGGACCGGGAACCGCGACTACAGTGCGCAGTTGGTGGTTCCTGCGATTATGGATTTCGTGCAGAGGTTCGAGGGTGGAATCGAAGGTATCAGAAAAAGGAACCATGATGTTGTGGTTGAGATGGGGGAGATGTTGGTGCAGGCTTGGGAAACCCATCTTGGGAGTCCTCCTCACATGAGTGCTAGCATGGTGATGGTGGGTTTGCCTCCATGTTTGGGGATTTTCAGTGACTCTCATGCTCTCCAACTTAGGACGCGTTTGAGAGATGAGTTTGGGGTTGAAGTTCCCATTTATTTTGCTGGAGGAGAAGAAGCCTCTGTCACTGCCTATGCCCGAATTTCTCACCAGGTTTACAACACACTTCAAGACTATATTAAGTTTAAGGATGCAATTAATCAACTTGTCAGCCATGGCTTCACCTGTGCTCTTCTCTCCGATTGA 1323 0.5586 MASTEHQNGDAVSHSHKKLKPSNFITHAEIQSEFSHHDPAVARLNNGAFGCCPASVIAVQRDWQLKNLRQPDRFYFNHLKSGLLRSRTIIKDLVNAHHVDEISLVDNASTATAIVLQQAAWAFHDGTFQKGDVVLMLHYAYGAVKKAIEAYVVRAGGSVVEVPLRFPVTSNDEIIREFRKAIEKGKSQGNRIRLAVIDHVTSMPSMVIPVKELVTICREEAVDQVYVDAAHAVGCTRVDMQEIGADFYTSNLHKWFFCPPSVAFLYARASPKSRDLHHPVVSHEYGNGLAVESSWTGNRDYSAQLVVPAIMDFVQRFEGGIEGIRKRNHDVVVEMGEMLVQAWETHLGSPPHMSASMVMVGLPPCLGIFSDSHALQLRTRLRDEFGVEVPIYFAGGEEASVTAYARISHQVYNTLQDYIKFKDAINQLVSHGFTCALLSD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01326 440 SUPERFAMILY PLP-dependent transferases 34 429 IPR015424 -
Phco6g01326 440 PANTHER L-CYSTEINE DESULFHYDRASE 19 436 - -
Phco6g01326 440 Gene3D - 70 323 IPR015421 GO:0003824
Phco6g01326 440 Pfam Aminotransferase class-V 85 271 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01326 Phco-Chr6 13349977 13351299 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02546 2 55321518 55322873 Phco6g01326 6 13349977 13351299 PCT