Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02546 ATGTCTTCCACTACCGATAACCGTATCCACCAAAACAATCATCACAACGGTTCTCACGTAGCCAAAAAGCCCAAACTCTCCTCCCATATAACTGCGTCGGAAATCGAGTCCGAATTCGGGCACCACGACACCTCCGTCGCGCGCATCAACAACGGCAGCTTCGGCTGCTGCCCCGCCTCCATCATCGCCGCGCAGCACCGCTGGCAGCTCCGGTACCTCCGCCAGCCCGACCACTTCTACTTCAATGACCTCAAAACCGGCATCCTCCAATCGCGAACCCTAATCAAGGACCTCGTCAACGCCGACCACGTCGATGAGATCTCTATTGTCGACAACGCCACCACCGCTGCCGCCATCGTCCTCCAGCACGCCGCATGGAACTTCCGCGAAGGAAGATTCCAGAAAGGTGACGTCGTCCTCATGCTCCACTACGCTTACGGCGCCGTCAAGAAATCCATGGAAGCGTACGTCACTCGCGCCGGGGGTAATGTTGTCGAGGTTCCCCTCCCTTTCCCTGTTAACTCCAATGACGAGATCGTTTCCGAGTTTAGGAAGGCCTTGGAGAGAGGAAATAGTAACGGGAATAGGGTTAGGTTAGCGGTGATTGATCACGTGACTTCCATGCCGTGTGTGGTTATTCCTGTTAAGGAGTTGATTCAGATTTGCAGGGAGGAAGGGGTGGACCAGGTTTTTGTTGACGCTGCACATTCCATTGGGTGCACTGATGTTGACATGAAGGAAATTGGTGCTGATTTTTACACTAGTAATTTGCATAAGTGGTTCTTTTGTCCACCTTCAATTGCGTTTTTGTATACTCGTCGGAACCCTAAGGGTTCTGGTTCTGATTTGCATCACCCTGTGGTGTCTCATGAGTATGGCAATGGCTTGGCTGTGGAGAGTGCTTGGATTGGGACCAGGGATTATAGTGCACAGTTGGTTGTTCCTGCTGCGGTGGAGTTTGTTAACCGGTTTGAAGGGGGTATTGAGGGGATCAAGAAGAGGAATCATGAGGCTGTTGTGGAGATGGGGGAGATGTTGGCGAATGCATGGGGTACTCGGCTCGGGAGTCCCGCGCATATGTGTGCTAGCATGGTTATGGTTGGTTTGCCCGCTTGTTTGGGGATTGGAAGTGATTCTGATGCTCTCGAGTTGAGAACACAATTGAGGGATGCTTTTGGGGTTGAGGTTCCGTTATATTATCGGCCCCCAAGAGAGGGGGAAGTTGGGGTGATTACTGGGTATGCGAGAATTTCTCATCAAGTGTATAACAAAGTTGATGACTATTACAAGTTCAGGGATGCGGTTAACCAACTTGTGCAAAATGGGTTCACTTGTGCTGCTGGTCTTTCGGGTTGA 1356 0.514 MSSTTDNRIHQNNHHNGSHVAKKPKLSSHITASEIESEFGHHDTSVARINNGSFGCCPASIIAAQHRWQLRYLRQPDHFYFNDLKTGILQSRTLIKDLVNADHVDEISIVDNATTAAAIVLQHAAWNFREGRFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGNSNGNRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRRNPKGSGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAAVEFVNRFEGGIEGIKKRNHEAVVEMGEMLANAWGTRLGSPAHMCASMVMVGLPACLGIGSDSDALELRTQLRDAFGVEVPLYYRPPREGEVGVITGYARISHQVYNKVDDYYKFRDAVNQLVQNGFTCAAGLSG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02546 451 SUPERFAMILY PLP-dependent transferases 43 440 IPR015424 -
Phco2g02546 451 Gene3D - 59 323 IPR015421 GO:0003824
Phco2g02546 451 PANTHER L-CYSTEINE DESULFHYDRASE 11 446 - -
Phco2g02546 451 Pfam Aminotransferase class-V 84 367 IPR000192 -
Phco2g02546 451 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02546 Phco-Chr2 55321518 55322873 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02546 2 55321518 55322873 Phco2g02546 2 55321518 55322873 ECH
Phco2g02546 2 55321518 55322873 Phco6g01326 6 13349977 13351299 PCT