Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01287 ATGGGGTCTCTGGTTTCTGAAACAGCCAAGATGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTATAATCCTTCTGAAAGATGGGGGCATTCTGCTTGTTTCTCTGGGGGGCTTATGTATGTCTTCGGGGGATGTTGTGGAGGGCTACATTTCGGAGATGTTCTGTGTTTGGACCTTGTCAAAATGAATTGGAGCAAGCTTGCCACCACGGGTGAAAAGCCAGGCCCTAGAGATAGCCATGGTGCTGTTCTTGTAGGGCATAGAATGATAGTTTTCGGTGGCACCAATGGGTTAAAGAAGGTGAATGACACTCATATATTAGACCTTGTTACCAAAGAGTGGATTCGTCCTAAATGTGAAGGGACTCCTCCTTCTCCAAGGGAAAGTCACACTGCTACTCTAGTTGGTGATGAAAGACTAGTGATTTTTGGTGGCAGTGGTGAAGGTGACGCAAACTACTTAAATGATTTGCATGTTCTAGACCTTCGAACCATGAGGTGGACTTCTCCTCCGGTCAAAGGGGATTTGCCTGTCCCTAGGGACAGTCACAGCACTCTTGCAATTGGGAACAGACTTTTTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGCGATGTTAATGTGCTTGACATGGACACAATGACTTGGTCAAGGTTGAAAATTCAAGGCTCTTCCCCAGGAGTCAGGGCAGGTCATGCGGCTTTGAGCATTGGTACCAAGGTGTACGTGATTGGAGGTGTGGGAGATAAACGCTATTACAATGACATATGGGTGTTTGATATCTGCACCTGTTCGTGGGCTCAGCTTGATATTCGTGGTCAACCGCCACAGGGGCGATTTTCTCACACAGCTGTTTTGGCAGACATGGATATTGCCATATATGGCGGGTGTGGGGAAGATGAGCGTCCTTTAAACGAGTTGTTAGTGTTGCAGCTTGGAGCAGAACATCCTAACGGACGTTACAACATTTCCATGTGCAAAGTTTTTGGAACTTATTGGAATCAAGAACAGAGGACCATACCTGGAAGAGCTGATACAAGCTTGACAACTCCATGCCTGGAGAACAATATGGAAGCCATAGGAAAATGGACTAATGAAGTTGTGTCGGATAAAGTGCAACCTTGTAACATTAATTCGGGCACTTCACAACAAAAGAGGAAGAGAATTGCTGTGACAAAGGTGTGGGATGTTGAATCAGAACAAGAAGAACATTCTCTTTCACTGTCCCAGCATTCATCTCCTTCTCAATCTGATCAAGAACAGACCCCAGCTCAAAAAGCAAATGTTTCTATCATGGATTCTCAGAGGTATCATTGGTTTAAACAGGTCAATAAAAGTCCAAGCTATTGCCAGCTTGACAATGACTCAAGTAACACCACAGTTTTGAAGAATATCACACAAAGAAGTGTTCGTCCCATGAAACATCAACCTAAACAAGAGCAGTATGTTCACATTGATGATGGTAGAAAAGTACCTCGACACACTCAACACCTGATTGGTGCTGAAGTTCGGGGGAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGTTGTTAATGGAAGACTTTTCAGAGGAGTCTTATTTGCACCAGGAGCTGCAGTATTCTCCACATGTGTGGAGCCAAACAGTTCTTTATCACCTTCATTTCCCTCCACTCAAACCTTTATGAACTCAAATGATGTGAGGGATTCTGAGCAAGTAACTAGTTGTTCACGTGCAGAGCCCTGCCATGGCTTCAGGCAACCTGTGCTAGCTCAACCATCACCAGTAATGAGAAGGACTACTTCTGCATCTTTAGCCAAAGAGCATCAAATGAGGAGTGACCTTCAAGGCTTGGTTTTAACACTTGGAGGGCCTGCAAGTGGTAACCATGCTTGA 1893 0.448 MGSLVSETAKMKAMWLYPKVLGYNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLVKMNWSKLATTGEKPGPRDSHGAVLVGHRMIVFGGTNGLKKVNDTHILDLVTKEWIRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHVLDLRTMRWTSPPVKGDLPVPRDSHSTLAIGNRLFVYGGDCGDQYQGDVNVLDMDTMTWSRLKIQGSSPGVRAGHAALSIGTKVYVIGGVGDKRYYNDIWVFDICTCSWAQLDIRGQPPQGRFSHTAVLADMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEQRTIPGRADTSLTTPCLENNMEAIGKWTNEVVSDKVQPCNINSGTSQQKRKRIAVTKVWDVESEQEEHSLSLSQHSSPSQSDQEQTPAQKANVSIMDSQRYHWFKQVNKSPSYCQLDNDSSNTTVLKNITQRSVRPMKHQPKQEQYVHIDDGRKVPRHTQHLIGAEVRGKVDGAFDSGLLMTAVVNGRLFRGVLFAPGAAVFSTCVEPNSSLSPSFPSTQTFMNSNDVRDSEQVTSCSRAEPCHGFRQPVLAQPSPVMRRTTSASLAKEHQMRSDLQGLVLTLGGPASGNHA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01287 630 MobiDBLite consensus disorder prediction 403 429 - -
Phco6g01287 630 SUPERFAMILY Kelch motif 20 236 IPR015915 GO:0005515
Phco6g01287 630 Gene3D - 13 120 IPR015915 GO:0005515
Phco6g01287 630 Gene3D - 121 389 IPR015915 GO:0005515
Phco6g01287 630 Pfam Galactose oxidase, central domain 231 279 - -
Phco6g01287 630 MobiDBLite consensus disorder prediction 408 429 - -
Phco6g01287 630 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 14 558 - -
Phco6g01287 630 Pfam Galactose oxidase, central domain 87 135 - -
Phco6g01287 630 Pfam Galactose oxidase, central domain 37 85 - -
Phco6g01287 630 Pfam Galactose oxidase, central domain 139 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01287 Phco-Chr6 12942439 12946293 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01287 6 12942439 12946293 Phco6g01287 6 12942439 12946293 ECH
Phco2g02572 2 55546530 55550457 Phco6g01287 6 12942439 12946293 PCT