Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02572 ATGAGTTCTTCGGTACCTCAAGTTTCCAACAAGAAAACAATGTGGCTGCATCCAAAGGTTTTGGGTTTCAATCCTTCTGAAAGATGGGGGCATTCTGCTTGCTTCTCCAAGGGCCTTATGTATGTCTTTGGGGGTTGCTGTGGGGGGCTGCATTTTTGCGATGTTCTCACTCTGGACCTTCACAAAATGGTTTGGAGCAAGCTTACTACTACTGGTGAGAAGCCAGGGCCGAGAGATAGCCACAGTGCTGTTCTTGTGGGGCATAAAATGATAGTGTTTGGTGGCACGAATGGATTCAAGAAGGTGAATCACATTCACATACTTGATCTTGTTACCAAAGAGTGGTTTCGACCTGAATGTAAAGGGACTCCTCCTTCTCCACGTGAAAGCCATACTGCCACGCTGGTTGGTGATGAAAGGATAGTGATATTTGGTGGTAGTGGAGAAGGCCATGCTAACTATTTAAATGATTTGCATATTCTTGATCTTCGAACCATGAGTTGGACCTCCCCTGAGTTGAAAGGTGATTTGCCTGTCCCCAGGGACAGTCATAGTACCCTGGCAATCGGGAACAAACTTATCGTGTATGGTGGAGATTCTGGTGATCAGTATCATGGCAATGTTCATATGCTTGATATGGCTACAATGACTTGGTCTAGATTGACGATTCAAGGTTCTCCACCAGGAGTCAGGGCAGGTCATGCTGCAGTTAACATTGGAACAAAGGTATATATCATTGGAGGAGTTGGAGATAAACGTTACTATAATGACGTTTGGATCTTTGATATTTGCAATTTTTCGTGGACTCAACTTGATATACATTTTCAACAGCCACAAGGGCGATTTTCTCATACAGCTGTTGCTGCAGGCATGGATATTGCAATATATGGCGGGTGTGGGGAAGACGAACGTCCTCTCAATGAATTGTTAGTGTTGCAGCTTGCAGCAGAGCATCCAAATGGGCGTTACTACGTACCCATGCGCAAACCTATTGGAGCTTACTGGAATCAAGAGAAAAATATTTTCACAGCAGAAGCAGATACCAACTCGCAGAAAACTATCCTCGTGAGGAATAATGTGGAAGCTTTTGGAAATGGAGCTTATGAAATTGCATCAGAAAAATCGTCATCTTATCACTTTGATTCAGGTACATCACGACAGAAGAGGAGGAGAATTGCTGCTGCAAAGGTATGGGATGTTGAATCGGAACAAGAAGATAGTTTTCTTTCATTGTCTCTTCATTCATCTCCGTATCAATCTGATCAAGAACAGACCCCGAGTCAAGAAGCAAATACATTATTTCCAACCACTTCCCAACACGAAAATGTCTCAAATTATAAGAGAACTTTGAAGAATATCCCGCTTAAGACTCCACAGGCACTTCATTTCCTACAGTATAAACTAAAACAGGAACAATGTCTTCATGTTAACGAGGATAGAAAACGAGCTCAACGTCAGGCTGCAGAGCAGAAACTAATGATGCGACCCATTCAACACCTGATTGGTGCTGAAGTTGGGGAGAGAGTTGAAGGACCCTACGACTCGGTTTCGCTATCTCCTGCAGCTGTGAATGGAAGGATTTTCCGGGGAGTCATATTTGCACCTGGAGCAGGAGTTGTCTCAAAGGGGGCTAGTGTTAAACCAAATTGTCCTCTAACTGCTTCACTTCCTTCTTCTCAAGCCTTTTTAAGGGCTTCACAAGAAGCACCAATTTGTTTGCATGCAGAGCCATACCATGGTTCACGATCAAGGCAAACCCCAGTGGCTTTACCATTTCCAATCATGGGAGCGACTCCTAGTGTTGTTTCGAAGGAGCATAAGATGAGGAGTGATCTTCAAGGTTTGGCTCTAACACTTGGAGGACCGGCTAGTGGAAATCCCCAGATAAAACATTGA 1896 0.4399 MSSSVPQVSNKKTMWLHPKVLGFNPSERWGHSACFSKGLMYVFGGCCGGLHFCDVLTLDLHKMVWSKLTTTGEKPGPRDSHSAVLVGHKMIVFGGTNGFKKVNHIHILDLVTKEWFRPECKGTPPSPRESHTATLVGDERIVIFGGSGEGHANYLNDLHILDLRTMSWTSPELKGDLPVPRDSHSTLAIGNKLIVYGGDSGDQYHGNVHMLDMATMTWSRLTIQGSPPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDVWIFDICNFSWTQLDIHFQQPQGRFSHTAVAAGMDIAIYGGCGEDERPLNELLVLQLAAEHPNGRYYVPMRKPIGAYWNQEKNIFTAEADTNSQKTILVRNNVEAFGNGAYEIASEKSSSYHFDSGTSRQKRRRIAAAKVWDVESEQEDSFLSLSLHSSPYQSDQEQTPSQEANTLFPTTSQHENVSNYKRTLKNIPLKTPQALHFLQYKLKQEQCLHVNEDRKRAQRQAAEQKLMMRPIQHLIGAEVGERVEGPYDSVSLSPAAVNGRIFRGVIFAPGAGVVSKGASVKPNCPLTASLPSSQAFLRASQEAPICLHAEPYHGSRSRQTPVALPFPIMGATPSVVSKEHKMRSDLQGLALTLGGPASGNPQIKH 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02572 631 Gene3D - 120 364 IPR015915 GO:0005515
Phco2g02572 631 Pfam Kelch motif 231 271 IPR006652 GO:0005515
Phco2g02572 631 SUPERFAMILY Kelch motif 72 315 IPR015915 GO:0005515
Phco2g02572 631 Gene3D - 10 119 IPR015915 GO:0005515
Phco2g02572 631 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 14 452 - -
Phco2g02572 631 Pfam Galactose oxidase, central domain 87 135 - -
Phco2g02572 631 Pfam Galactose oxidase, central domain 39 85 - -
Phco2g02572 631 Pfam Galactose oxidase, central domain 139 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02572 Phco-Chr2 55546530 55550457 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02572 2 55546530 55550457 Phco2g02572 2 55546530 55550457 ECH
Phco2g02572 2 55546530 55550457 Phco6g01287 6 12942439 12946293 PCT