Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01265 ATGGGTTTTGGCAATGCTGTGTGCTGCTTGGAGGAAAAGTTAGGATTTTTTTTACTTGGTATAAAGATGAGGACAGGGTCTTCTATTTTTTCCCTATTGCATGTATCCAGATGCAGCATGCATAGCTTAGCCAATTGTAGGGAAGATGAAGCATTATGCAGTTTTATCAAGATTTATGGAAACAACTCTAGCATCAGACTACTTGGTTCTAGAATTTATGGGCTTGAGAGAGGATTTGCTACTAAGTGGACTAAAAGACTTGTAGCTACAAGAGCAGAAGGAAGTAAACAAACCACTTGGAACACCAAATCAAAAAGTACAAAGCATGAAATTTCTAGGGAGGAGATTTTACCAAATGCTACAGTGAATGTAAATATGACACAGCTAGATCAGTTCCAGAAAATTCAGTGGCCTGAAGTACAAGAAATTGCTCAGTATAAGAACTTGTCTGACCTACTCACTGTTATTGTTTTTGATCTTGAGACTACTGGGTATAGCAGAGTAAAGGATCGGATCATTGAGATTGCACTTCGAGATCTCCAAGGTGGTGAGGGCAGCACTTTCCAAACTCTTGTAAATCCTCAATGCCATGTACCTAATTCACGTATTCATGGAATTGCTACCCATATGGTGAACCGAACTGATGTGCCAAGGATGGAAGAGCTGGTACCCATCTTGTTGCAGTACATAAAAAGGCGAGAGAAAAATAGTGGATATGTGTTATGGGTTGCACACAATGCTCGCACTTTTGATGCACCTTTCCTCATCCAGGAGTTCATTCGATGTTCCGTGGAGATTCCTGATAATTGGGTGTTTCTGGACACCCTTCCTCTGGCACGTGAACTGATGAAGTCTGGAACAAAGCTTTCTTCAGCGTCACTGGTTGCCCTTGCTGAGTTTTACAGAGTTGAAGTGGATGGATCAGCCCACAGAGCCATGGTAGATGTGAACACATTATCCCAGATACTTCCATTGTTGACCTCTGATCTGAAGTTGACGTTTTCCAGCCTTATCAAAAAATCTTTCAATTTATCAGATCTGATGAGGGCTATGAAAGGGAAGAAGAATTCACACCAGTAA 1080 0.412 MGFGNAVCCLEEKLGFFLLGIKMRTGSSIFSLLHVSRCSMHSLANCREDEALCSFIKIYGNNSSIRLLGSRIYGLERGFATKWTKRLVATRAEGSKQTTWNTKSKSTKHEISREEILPNATVNVNMTQLDQFQKIQWPEVQEIAQYKNLSDLLTVIVFDLETTGYSRVKDRIIEIALRDLQGGEGSTFQTLVNPQCHVPNSRIHGIATHMVNRTDVPRMEELVPILLQYIKRREKNSGYVLWVAHNARTFDAPFLIQEFIRCSVEIPDNWVFLDTLPLARELMKSGTKLSSASLVALAEFYRVEVDGSAHRAMVDVNTLSQILPLLTSDLKLTFSSLIKKSFNLSDLMRAMKGKKNSHQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01265 359 Gene3D - 153 343 IPR036397 GO:0003676
Phco6g01265 359 SMART exoiiiendus 154 332 IPR013520 -
Phco6g01265 359 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 153 336 - -
Phco6g01265 359 CDD DEDDh 156 323 - -
Phco6g01265 359 Pfam Exonuclease 156 322 IPR013520 -
Phco6g01265 359 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 82 349 IPR040393 GO:0008408
Phco6g01265 359 SUPERFAMILY Ribonuclease H-like 151 332 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01265 Phco-Chr6 12735763 12737692 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02593 2 55726909 55729215 Phco6g01265 6 12735763 12737692 ECH
Phco6g01265 6 12735763 12737692 Phco6g01265 6 12735763 12737692 ECH
Phco2g02593 2 55726909 55729215 Phco6g01265 6 12735763 12737692 PCT