Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02593 ATGAAGACGGGCTCCATGATTTTTTCATTATTATATCTACCTAGATCTAGAATACAAAGATTAGCTAATTACTGGGGAGAAACTTTCCACAGTTTCAGTTCGACTTGTGGAAACAATTCTAGCATCAGGCCGCTTAGTTATAAAATTTATGGTCTTCAGGGAGGACAGAGAAAGAAGTGGACAAGACCTATAACTACAAATACAGAAGGCAAGGGGAACACCAAATCAAAAAGTATCAAGCATGAAATTTTGAGTGAAACCATTATAGAAGGTGCAACAGTAGATGTAAATAAAACACAGCAAGATCAATTCCAGGAAATTCAGTACAGTGACATACAACAAGAGATTGCCCAGAATAAAGACTTGTCTAGTTTATTTACTGTTATTGTTTTTGATATCGAGACCACAGGGCTTAGCAGAGAGAAAGAAAGGATCATTGAAATTGCATTTCGAGATCTTCAGGGTGGTGAGAACAGTACTTTTCAGACTCTTGTCAACCCTCAATGCAAAGTTCCTAATTCACATATTCATGGCATTACTACTCAGATGGTCAACAAACCTGATGTTCCAAGGATGGAGGACCTAATTCCTATCTTATTGCAATATGTTCGAAGTCGTGAGAAGCCTGGGGGACATGTGTTATTTGTTGGTCATAATGCTCGTTGTTTTGATGTCCCTTTCATCATGAACGAATTACGACGTTATTCTATGAACATTCCTTCTAATTGGTTGTTCTTAGACACTCTGCCTTTAGCACGTGAACTAATGAAATCTGGAGGAACTAAACTTTCTTCAACTTCCCTTCCTGCCCTTCGTGACCTCTACGGAATTAAAGTGGATGGATCAGCTCACAGGGCCATGGTAGATGTGAACACATTGTCCTTGGTTCTTCCCAGGTTGACCCGAGATCTGAAATTGACCCTATCTGCTCTTGTGAAAAAATCATTCAAAGAATCAGATATTGTCAACTCCAAGAAGAAGAAAACTTCAGACTAG 996 0.3896 MKTGSMIFSLLYLPRSRIQRLANYWGETFHSFSSTCGNNSSIRPLSYKIYGLQGGQRKKWTRPITTNTEGKGNTKSKSIKHEILSETIIEGATVDVNKTQQDQFQEIQYSDIQQEIAQNKDLSSLFTVIVFDIETTGLSREKERIIEIAFRDLQGGENSTFQTLVNPQCKVPNSHIHGITTQMVNKPDVPRMEDLIPILLQYVRSREKPGGHVLFVGHNARCFDVPFIMNELRRYSMNIPSNWLFLDTLPLARELMKSGGTKLSSTSLPALRDLYGIKVDGSAHRAMVDVNTLSLVLPRLTRDLKLTLSALVKKSFKESDIVNSKKKKTSD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02593 331 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 126 310 - -
Phco2g02593 331 CDD DEDDh 129 297 - -
Phco2g02593 331 Pfam Exonuclease 129 293 IPR013520 -
Phco2g02593 331 SUPERFAMILY Ribonuclease H-like 125 308 IPR012337 -
Phco2g02593 331 SMART exoiiiendus 127 306 IPR013520 -
Phco2g02593 331 Gene3D - 126 318 IPR036397 GO:0003676
Phco2g02593 331 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 62 323 IPR040393 GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02593 Phco-Chr2 55726909 55729215 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02593 2 55726909 55729215 Phco6g01265 6 12735763 12737692 ECH
Phco2g02593 2 55726909 55729215 Phco2g02593 2 55726909 55729215 ECH
Phco2g02593 2 55726909 55729215 Phco6g01265 6 12735763 12737692 PCT