Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01248 ATGGGGCATTTTTCATCTGCGTTCAGTAGGTTGGCAAAGTCCTTTGCAACGAAGAGAGGTGGGAGTTCTGATGGATGCAGCGGAAGAGAAGCTGCGGAAGCAATGGCAAAGGAAGCCAAAAAAAATCACTTCATATTGCATAGCTCCGGCACCATTAATGTTGATGGTTCAAACAACTTTGCCTCACTTTTTTCCAAAAAAGGACAGAAAGGAGTCAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGTGGGATTTTTGACGGGCACGGGCCATGGGGTCACTTTGTGGCCAAGAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTTCACTTGATCCAGATGTTGATGTTGATATTGAGACAGAGAAAAAGCAACACCGGTTCAATATATGGAAGCACTCTTACTTGAAGACTTGTGCTGCCATCGATCGAGAACTAAAGCAGAATCGCAAGATAGATTCATTTTTCAGCGGAACAACTGCTTTGTCCATTGTTAGACAGGGTGAACTCATTGTAATTGCAAACGTTGGAGACTCTCGTGCTGTGTTAGCCACAGCATCGGATGATGGAAGTTTGGTTGCAGTTCAGTTGACAGTAGATTTCAAGCCCAGTTTACGTCAGGAAGAGGAGAGAATACTGGAGTGCCAGGGACGAGTTTTCTGCTTGGAAGACGAGCCCGGGGTGCACAGGGTGTGGTTACCGGATGAGGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCATCAAAGATTACGGTCTTATTTCAGTGCCTGAGGTAACACAGAGGAACATAAGCAGCAAAGACCAGTTTGTTGTGTTAGCCACTGATGGGGTGTGGGATGTAATCTCCAATCAAGAAGCAGTGGATATTGTGTGTTCAACTGCAGACAGAACAGAGTCTGCCAAACATTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGAAGGGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCATCACTTCACCAAGTTGATGCCACCCTAGGATAG 1107 0.4616 MGHFSSAFSRLAKSFATKRGGSSDGCSGREAAEAMAKEAKKNHFILHSSGTINVDGSNNFASLFSKKGQKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLSQTSLDPDVDVDIETEKKQHRFNIWKHSYLKTCAAIDRELKQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATASDDGSLVAVQLTVDFKPSLRQEEERILECQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKDYGLISVPEVTQRNISSKDQFVVLATDGVWDVISNQEAVDIVCSTADRTESAKHLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLHQVDATLG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01248 368 FunFam Probable protein phosphatase 2C 34 51 356 - -
Phco6g01248 368 SMART PP2C_4 51 352 IPR001932 -
Phco6g01248 368 CDD PP2Cc 59 354 IPR001932 -
Phco6g01248 368 Gene3D - 55 356 IPR036457 -
Phco6g01248 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Phco6g01248 368 SUPERFAMILY PP2C-like 59 356 IPR036457 -
Phco6g01248 368 Pfam Protein phosphatase 2C 84 332 IPR001932 -
Phco6g01248 368 PANTHER PROTEIN PHOSPHATASE 43 352 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01248 Phco-Chr6 12550690 12552336 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01248 6 12550690 12552336 Phco6g01248 6 12550690 12552336 ECH
Phco2g02599 2 55770324 55771965 Phco6g01248 6 12550690 12552336 PCT
Phco11g01566 11 11938323 11939573 Phco6g01248 6 12550690 12552336 PCT