Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01566 ATGTCAAACCGAGTTTGCATAAAAAAAGGGTTGTTGACAGTAATGGGTGTGAAGTTTGTGGGCATAATGGAATACCCAACTCGTTTTTCCATGTGTGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGACAACTACAAGAACCTTGTCAAGGTCATCTCCATTCAAGACCTCATCCTTGCAAACCCAAGGAACCCATCAGTCTCCATTGATTTCCTCTCCAAGCTCTCCCAGAAGCTCCACCTAAACCGCGGGCCCATTGCCTTCCTTCGCAAGTTTCCTCACATTTTCGACATTTACTATGACCAATCCAAGTTGAAGCCCTTTTGCAGGTTAACTGACGCTGCTCTTGGTGTTACACGCCAGGAAGCGGTGGCCATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTTCGGATACTGTCCATGTCAGCATCCAGAATGGTGCCTCTTAGGGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTCGAGGACTCTGTTATATCTGCTAATTCTGGTATTTTTCAGCTGTGCGATGGGCATGAACAGAATACTCATTTGTTGAAGCTGGTTGATGGTGTTTCCAGCAATGGCATTAGGGCGGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAAGAGGACTGCAGTGTTGATAGGATGGAAATGCAGTTCAGTTTCAAACAGGGGTATCCCCCGGGGATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAGTGGCAAAGGTTGCCATATGTGGGGCCTTATGAACAGCCGGGTGAGAAGAGGAAGTCTAAGGCTGGAATGATCGCCATGGAGAAGCGAGCAGTGTCGATTGTTCATGAGTTCTTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGAAAATGGTTTGGGATTGATTTAAATATACGGGATCTTTTCTTGGACCACCCAGGGATCTTTTATTTGTCAACCAAGGGTAAAAGACATACTGTTTTCCTGAGGGAAGCTTATGAAAGAGGGTGTTTGGTAGAACCAAATCCTGTCTATGATGCAAGGAGACGGCTACTTGATCTTGTTGTTTTAGGACGTCGGGGTTTGCCAGCTGTTAATTCGAAGTTGCAGGATTCAAGCAGCTGCAATGAGGATAGACAAGAGGAAAACCAGCAAAGACATGATTTGTCACCATCTTGA 1251 0.458 MSNRVCIKKGLLTVMGVKFVGIMEYPTRFSMCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLVKVISIQDLILANPRNPSVSIDFLSKLSQKLHLNRGPIAFLRKFPHIFDIYYDQSKLKPFCRLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGIFQLCDGHEQNTHLLKLVDGVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKQGYPPGMRLSKNFKAKVKEWQRLPYVGPYEQPGEKRKSKAGMIAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLVEPNPVYDARRRLLDLVVLGRRGLPAVNSKLQDSSSCNEDRQEENQQRHDLSPS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01566 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 34 405 IPR045040 GO:0003723
Phco11g01566 416 MobiDBLite consensus disorder prediction 398 416 - -
Phco11g01566 416 Pfam Plant organelle RNA recognition domain 48 383 IPR021099 GO:0003723
Phco11g01566 416 MobiDBLite consensus disorder prediction 391 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01566 Phco-Chr11 11938323 11939573 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01566 11 11938323 11939573 Phco11g01566 11 11938323 11939573 ECH
Phco11g01566 11 11938323 11939573 Phco6g01248 6 12550690 12552336 PCT