Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01090 ATGGGTATGATCGGAAAAAGTTCCTCTCTCCCCTTTCTTTTTTTCTTTACTGTTTTCTGGTTCCTTCATCTTCCCATGTCAGATGCAGATAAAACAAACTTGGTTTTCAAGGGCTGTGCAGAGCAGAAACTACAGGACCCAACTGGGATATACTCACGGAACCTGAAATCCCTCTTGGATTTTTTGGTGTCACAATCTGGAAAAAAGGCCTTCTTCACCACAACCTCTGGAGAAGGCCAGAATGTGATCATGGGTCTGTACCAATGCCGAGGGGACCTCTCAAACACTGCTTGCTACAACTGCGTGAGCAAGATTCCTGACATGCTTGAAAACTTGTGTGGCAAGGTGGTAGCTTCGCGTGTGCAGCTTACTGGATGCTACCTGAGGTATGAAATTGTTGGGTTCAAGCAGGTGCCTGAGACTCAATTGCTTTATAAGGTTTGTGGGTCCAAGAAAGATAGTTATGATGATGGGTTTGACGAGAGAAGGGACTCTGCATTTGGTATGGTGGAAAGTGGTGTGAAAAATGGTGGAAACTTGTTTTACACAGGGAGCTATCAGTCTCTCTATGTGTTGGGGCAGTGTGAGGGTGATTTGGCCAAAGATGATTGTGGGGATTGTGTGAAGAGTGCTGAGGATCAAGCCAAAGCTGAGTGTGGTGACCCTATTTCTGCACAAATTTATCTACACAAATGCTTCATTAGCTACAGCTTTTATCCTAAGGGAGGAGGGTCATCATCTTCTGCAGGATCACTGGAGCAACAAGAGACACAGAGGACTGTAGCTCTTGCAGTTGGAGGGTTTGCAGCTTTGGGTTTCTTAATTGCTTGTTTGTTATTTCTCAAGTCATTGCTGAAGAAAAAAGGTCTGTGTGATAGATCTCTCACCCTTGTCCCTACCATTGGTTCCTGTGGGGTTGGAAGGCTTCGTGAGGATTGCCAAGTTCCATTTTGTAGTGCTATTTCATCCAGAAGTGCTAGTCACAACCAACTGGATCATCAGAATGCATCAATCGAACAGCGTACTACAGATCTAGTGGACAAGAGTCTCGAGTCTAAGCCTAAACCTGTGAAATGCGATCTAAATTCTACCCAAATATCATTATATTCAGCACAGGAAGCCCTTCTCAAGTTCATCACAGAAAAATATAACGCAGCACCAGCTCAATGCATACTGAAACAGAATCATTCTACTAAAAACAGCAGGTAA 1209 0.4409 MGMIGKSSSLPFLFFFTVFWFLHLPMSDADKTNLVFKGCAEQKLQDPTGIYSRNLKSLLDFLVSQSGKKAFFTTTSGEGQNVIMGLYQCRGDLSNTACYNCVSKIPDMLENLCGKVVASRVQLTGCYLRYEIVGFKQVPETQLLYKVCGSKKDSYDDGFDERRDSAFGMVESGVKNGGNLFYTGSYQSLYVLGQCEGDLAKDDCGDCVKSAEDQAKAECGDPISAQIYLHKCFISYSFYPKGGGSSSSAGSLEQQETQRTVALAVGGFAALGFLIACLLFLKSLLKKKGLCDRSLTLVPTIGSCGVGRLREDCQVPFCSAISSRSASHNQLDHQNASIEQRTTDLVDKSLESKPKPVKCDLNSTQISLYSAQEALLKFITEKYNAAPAQCILKQNHSTKNSR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01090 402 ProSiteProfiles Gnk2-homologous domain profile. 141 241 IPR002902 -
Phco6g01090 402 Pfam Salt stress response/antifungal 159 238 IPR002902 -
Phco6g01090 402 Pfam Salt stress response/antifungal 46 131 IPR002902 -
Phco6g01090 402 FunFam cysteine-rich repeat secretory protein 3 31 135 - -
Phco6g01090 402 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Phco6g01090 402 Gene3D - 31 135 IPR038408 -
Phco6g01090 402 Gene3D - 140 240 IPR038408 -
Phco6g01090 402 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 285 - -
Phco6g01090 402 FunFam cysteine-rich repeat secretory protein 3 141 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01090 Phco-Chr6 10994918 11001195 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01090 6 10994918 11001195 Phco6g01090 6 10994918 11001195 ECH
Phco2g01892 2 49535616 49536729 Phco6g01090 6 10994918 11001195 PCT