Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01892 ATGGGTACACTCAAAACAAAACACCACATTCACACGCTCCTCTTTCTCACTGCACTCTTCCTTTTCGTTTCCACACCCACCTCTCTTGCAGACAACACAGACTTGATCTACAAGGGTTGCGCCGACCAGAAACTGCAACAACCCTACACGCAGAATCTCAAACCGCTGTTATCGTCCTTGGTGGCGGAGTCTGCGCAAAAGGGCTACGCCGCGACTACGCAGAACGCGCTCACCGGCGCCTACCAATGCCGAGGGGACCTCACCGCCTCCGACTGCCACAGCTGCGTGGCCAAGATTCCGGACATGCTGGGGCGCCTGTGCGGCGAGGCTTCTGCGGCGGCGCGCGTCCAGCTCAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGCAGGTTGCGGCGACGCAGCTTCTGTACAAGGTTTGTGGGGGGCGCAGGGTGGTCGACGGCGGGGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGTGGAGAACGGCGTGCAGAGCAGTGGGAACTTGTTCTACACTGGGAGTTACCAGAGCCTCTATGTGTTGGGGCAGTGCGAGGGTAATTTGGGAAATGCAGATTGTGGGGCTTGTATCAGGAGTGCTGCGGAACAGGCTAAGGATCAGTGTGGCTACTCTATTTCCGCTCAGGTTTATCTTCAAAATTGTTATCTCAGTTACAGCTTTTACCCCAATGGAGTTCCCACCTCCTCTTCTTCCTCAGGATCAGAAGGAGGAGGGCATCCACACACGGAGAGGACGGTGGCGCTTGCGGTGGGTGGGGTGGCGGCTCTGGGATTCTTGATTGTTTGCATGCTATGTCTGAAGTCGGTGTTAAAGAGAAGAGGTGGGAAGCGTTAG 873 0.5727 MGTLKTKHHIHTLLFLTALFLFVSTPTSLADNTDLIYKGCADQKLQQPYTQNLKPLLSSLVAESAQKGYAATTQNALTGAYQCRGDLTASDCHSCVAKIPDMLGRLCGEASAAARVQLSGCYLRYEVVGFKQVAATQLLYKVCGGRRVVDGGGFEARRDAAFGMVENGVQSSGNLFYTGSYQSLYVLGQCEGNLGNADCGACIRSAAEQAKDQCGYSISAQVYLQNCYLSYSFYPNGVPTSSSSSGSEGGGHPHTERTVALAVGGVAALGFLIVCMLCLKSVLKRRGGKR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01892 290 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 282 - -
Phco2g01892 290 Gene3D - 134 235 IPR038408 -
Phco2g01892 290 Gene3D - 32 130 IPR038408 -
Phco2g01892 290 ProSiteProfiles Gnk2-homologous domain profile. 31 130 IPR002902 -
Phco2g01892 290 FunFam cysteine-rich repeat secretory protein 3 136 235 - -
Phco2g01892 290 ProSiteProfiles Gnk2-homologous domain profile. 136 236 IPR002902 -
Phco2g01892 290 Pfam Salt stress response/antifungal 44 126 IPR002902 -
Phco2g01892 290 Pfam Salt stress response/antifungal 174 233 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01892 Phco-Chr2 49535616 49536729 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01892 2 49535616 49536729 Phco2g01892 2 49535616 49536729 ECH
Phco2g01892 2 49535616 49536729 Phco6g01090 6 10994918 11001195 PCT