Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01038 ATGTTTAACTGGCCAAGAGATGTTAGTGCTTCTAATGTATTCAATTGGAAACGTCAAGGTGAATCATCTGAAAGAAGAGGTTTACTTCAGTATGTTCCAGCAGAGATTGAAATGTCGGATTATAGAAGGATCCCAATTCCAGATAGTAGGAGCCCTTCAAGCCTACTTAATAGTGAGAGCCTTAACGTGCAACCAATTGCGGATTTGGATTTCTTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATTGTTGAACTTCTGAGTCTCGGGTTCACCATATGTCTTTCAGGATTTATGTTTCTATATGTTGACTGGAATGGGCTCCGTAATGCAAAGTGTGGGATGGAGGCAGTTGAATCTGGAAGGGAACCTTGTGATCTTGCTAAGGAAGCTCTTCATCAACACCCTTTAACCCCATTAACTTTAGTCAGAGCTATTATTGTTGGATACCTGGGAGTATTTTTTGTCTATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTGAAGTATACACTGAAAATCCGTCAGTTTTACTACAACAGTCTCCGTCTAACAGATAGTGAAATTCAAACTATGCCCTGGGCTACAATTCTTGAAAAGACTGTTAATTTGCAAAACTCACAACAACTCTGTGTGGTAAAGAATCTTTCTGCTCATGACATTGTGATGAGGTTGATGCGAAAGGAGAACTACTTGATTGGGATGCTCAACAAGGGTGTGCTTGCCTTCCCCATTTCTAAGTGGGTTCCAGGTGCTGGATCAACAGTGAAATCTGGTACTGACGGAACACAATATCGTGTAATACTACCCAGGACCCTTGAGTTGGCTTTAAATTGGTGCATCCTGCAAAGCATGTTTGACCGATTCAAAGACATTAAAGAGAAGACTTATGGTACTTGGGATTGCAATGTTTTTACTTTCTCCATTTATTGGCATATTCATGCTGGCACATCTCTTTCTGAGGTTGATCATTTGTTCAAGCATCGGATTAATACGAGTGTATTTCATGCTTCTAACTATATCAAGCAATTTCCTTCACCAATCATATCTGTGATTGCAAAATTCATCTCATTTGTATCTGGTGGCTTTGTTGGGATTCTGATCATCCTTGCTTTTTTAGAGGAGTCTCTGCTGGAGGGTCATATATTTGGTCGGAACTTGTTGTGGTATGCGGCTATTTTTGGAACTATAAATGCTCTTAGATGGGCTGCATTTACAGATGAGGAGCTTTTAGTCACTGATCCAAAAGGAACAATGTCAATGGTAGTTGACCATACACATTATATGCCCAAGAGATGGCGGGGCAAAGAAAGTACTGAAATGGTCCGGATTGAGTTTGAAACCTTATTCCAGTATAGTGTGATGATGTTACTTGAGGAGATGACTTCAATTTTCGTTACTCCATTCTTGCTTTTGTTTGTTGTCCCAGAGCGGGTTGATGATATCTTGCAGTTTATTGAAAATTTTACTGTATATGTTGAAGGTGTTGGTGATGTTTGCAGCTTTAGTGTCTTCAATTTTCAAGAGTATGGAAACAGTAGTTATGGCTCTCCATTTAATGTGCCTCGTAGCCAGAGAAGTTCTCAGGGGAAGTTGGAGAAATCATTCTTGAGCTTCCAGAGTAGTTACCCTTCTTGGGAGCCAAATGCTGAGGGAAAGCAGTTTCTACAAAATCTGAGAACATTCAGAGACAAAAAATTAGCAGACCATGGATTTGTCCCCCTCAGACCATGGAGAGATGATGCCAACACGGGAAGCTATGGAGACAGAAACAGTTTTACGTCCTGGGGAATGTCACACGGTACTTTTGTGACCAGCAATCGAAACAATCACCCCTATCTTTTAGATTGGTACTACATTTCCCAACCTCGTTATGCAACTCCCAGACACGTTTCAACTAATCATTCTGAAGTAACTCAGCATCGTTCCCCAGATAGGATGCTTTCCATATTGACACAAAATGAACATGAATATGAAGAATACACGAACAAGTTTTGCAATGAACGTGCTGCTTCATATCTAGGGGCTTCCACATCAACTTCCATCTTCAGGGAAAGCCTAATTGATGATCCACATTCCATTGATGTGCCTCTCACTACCAGTAGTCGTTGGTGGGATAGAAGTCAACCCCGGATTGAACATGGTCAGACAAGCTTTATGGATCCACCAGATTTCAATCACCGGGATAAATTTTCCGATAGAGGGTCAGAAGATCAATGTCAGGAACATAGCTTTTTGGAGCCACCAGATTTCAATTTAGGAACACAATACCATGATAAGTTTTCTGATAACTGGTCAGAGGATCATGATGGGGAGCAATACTTGGACCGGGGAGATTATCACGAGCAATCTAGTTTGGCACAAGCAGATAATTCAGATGCACGAGAATTGAGTCTTCATTTTGGTGATGTTTATTGCAGCCCCCCCTAG 2463 0.4093 MFNWPRDVSASNVFNWKRQGESSERRGLLQYVPAEIEMSDYRRIPIPDSRSPSSLLNSESLNVQPIADLDFFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICLSGFMFLYVDWNGLRNAKCGMEAVESGREPCDLAKEALHQHPLTPLTLVRAIIVGYLGVFFVYWIFCFLRFFVQLKYTLKIRQFYYNSLRLTDSEIQTMPWATILEKTVNLQNSQQLCVVKNLSAHDIVMRLMRKENYLIGMLNKGVLAFPISKWVPGAGSTVKSGTDGTQYRVILPRTLELALNWCILQSMFDRFKDIKEKTYGTWDCNVFTFSIYWHIHAGTSLSEVDHLFKHRINTSVFHASNYIKQFPSPIISVIAKFISFVSGGFVGILIILAFLEESLLEGHIFGRNLLWYAAIFGTINALRWAAFTDEELLVTDPKGTMSMVVDHTHYMPKRWRGKESTEMVRIEFETLFQYSVMMLLEEMTSIFVTPFLLLFVVPERVDDILQFIENFTVYVEGVGDVCSFSVFNFQEYGNSSYGSPFNVPRSQRSSQGKLEKSFLSFQSSYPSWEPNAEGKQFLQNLRTFRDKKLADHGFVPLRPWRDDANTGSYGDRNSFTSWGMSHGTFVTSNRNNHPYLLDWYYISQPRYATPRHVSTNHSEVTQHRSPDRMLSILTQNEHEYEEYTNKFCNERAASYLGASTSTSIFRESLIDDPHSIDVPLTTSSRWWDRSQPRIEHGQTSFMDPPDFNHRDKFSDRGSEDQCQEHSFLEPPDFNLGTQYHDKFSDNWSEDHDGEQYLDRGDYHEQSSLAQADNSDARELSLHFGDVYCSPP 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01038 820 Pfam Autophagy protein ATG9 63 307 IPR007241 GO:0006914
Phco6g01038 820 Pfam Autophagy protein ATG9 331 517 IPR007241 GO:0006914
Phco6g01038 820 MobiDBLite consensus disorder prediction 725 749 - -
Phco6g01038 820 PANTHER APG9 AUTOPHAGY 9 332 772 IPR007241 GO:0006914
Phco6g01038 820 MobiDBLite consensus disorder prediction 734 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01038 Phco-Chr6 10327038 10332523 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01038 6 10327038 10332523 Phco6g01038 6 10327038 10332523 ECH
Phco2g01842 2 48986699 48995184 Phco6g01038 6 10327038 10332523 PCT