Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01842 ATGCAACCCAATGGGTTGAAGGCCTTCGAAACTGTTTCTGATTTCCCTATTTTGTCTCATTTCACGTTTCCTGGAATATTTTTGCTGCAAAGGTTGGTTTTTGACATGTTTGGTTATAAGTGTCGATTAAGCAATCATGCTGTGGTGATCGGTCTTGTTTACGACACAAAGTGTCTTGTAATGCTGTTGTATTTTAATGCTAATTGGCATGGTCAAGTGAGTGCTGTCATGGATGTGAAGTTTGGCTTGCTGTATATATACAGTTTGGTGGTTAATGAGGAGTGTGGCGCTAATATAATTGAAGTTAAGTTCATGTTTGGATGTCTAGATTGTTCAAAACTGACACCAACATTTGTGCAATTGATTTTGATTCTTACTGAACCCCGAGAAGTGCTTCTCCCCCTTCAAATCATTTTTGGAAATGTTGATGCTGAGATTGATCATGAACAGCTATGGCCAAGGGGTGCCAGTGCTTTTAGTATATTCAAATGGAAACAACCTGGTGCATCATCTCTGACAGCAGGTTTACTTCAGGAAGATCAGCCAGAGATTGAATTGTCTGATTATGGAAAGATTCCTAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTAAATGGTGACAGCCTAAACGTAGAACCAATTTCTGATTTGGATCTATTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTATGGTGCATCATTATAAAATGGATTGTTGAGCTTCTAAGTCTGGGGTTCACCATATGTTTTTCAGGATTTTTTTTACTATATGTTGACTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGGATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCCTTAACCCCACTAACAATTACCAAAGCTATTATTGTTGGATACTTGGGATTATTTTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTGGAAACCCGGCATTTTTACTACAACAGTCTCCATGTTACTGACAATGAAATTCAAACCATGCCATGGGCTACAATTCTTGAAAAAGTTGTTCTGCTACAAAGGTCTCAACAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATAGTCATGCGGTTGATGCGGAAGGAAAACTACTTAATTGGAATGCTCAACAAGGGTGTGCTAGCTTTCCCTATTTCACAGTGGTTTCCCGGTGCTGGTCCTACAATGAAATCTGGTTCTAATGGAACACAGAATCGTGTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAGGTGATTTTGTGTCAAATCCGAAGACATTACAAAGAAGGCTCATGGTAGTTGGATTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTGGTGTATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCTAGCACTGCATCATCTCGAAGATGGTCAAATCTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATAGCAGTGTATTGCATGCTTCTGATTATCTCAAGCAATTTCCTTCACCAATCATTTCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAAGAGTCTCTACTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCCATTACCAATGAGCTTCTGGTTTTAGATGCTGAAGGAGCTATGTCTATGGTGGTTCAACATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAATCTGTCTGTGTTGAGTTCGCAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTGCTTCTGTTTATTGTCCCAAAGCGGGTTGATGATATCTTGCTTTTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAACATGGAAACAGTCATTATGGTTCTCCTTGCAATGCACCTCGTAGCCGGAGGAGTTCTCAAGGGAAGATGGAGAAATCATTGCTGAGCTTTCAGAGTAGTTATCCATCATGGGAACCAAGCGCACAGGGTAAACAGTTTTTGCTAAATCTTAGAAAATTCAAAGAGGAAAAGTTACCAGTACATGGAAACATACATGCAGCTTCCCCTCCTAGAATGTGGAGGGGTATTTCCAACATGGGAAGCAATATTGGAGACAGAAACAGGTTTATGTCCAGGGAAATGCCATACAGTACTTTTTTAACTGGCAATCACTTGGGTTCTCTGTGGTTGATTGAAGCCAACCAAAACAATCATCCCTATCTCCTTGATTGGTACTATACATCTCGATCTTATGACGTAAATCAAGGAGATGATCCTTCAGAACCGTTTGGAGTAATAGAGTCTAGAGAGCTTTGGATTCCCCCCAATATCACACACAATGAAAGTAGGTATGAGGAATACTCAAATGAGAATCGTCCAGGTTGGGCTCCATTTCATCTTGCGACTTCCACGTCCGTTCCCATTTTCAGGGAAAGCTCAATTCAGGATCAAAGTTATAATGAACTGACCCATACTACCAGCAGTCATTGGTGGAATAGAAGTCACGCGCAGCAGGGTGGACAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATCAGGAAAGATATAATTATTCTGAGAAGTTTTCTGATAGAGGGTCAGAGGATGAAGATCGTGAACAACGCTTGTACTCTAGAGATAATCACAGATTATCTAGAACATACACAGATGACTTAGGGGCTGGGGAATTTAATCTTCATTTTGATGATATTTATAGCAGACCTCCTGAAACCCCACCTGCAAGCTTTTGA 3018 0.4069 MQPNGLKAFETVSDFPILSHFTFPGIFLLQRLVFDMFGYKCRLSNHAVVIGLVYDTKCLVMLLYFNANWHGQVSAVMDVKFGLLYIYSLVVNEECGANIIEVKFMFGCLDCSKLTPTFVQLILILTEPREVLLPLQIIFGNVDAEIDHEQLWPRGASAFSIFKWKQPGASSLTAGLLQEDQPEIELSDYGKIPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTITKAIIVGYLGLFSIYWIFCFLRFFAQLKDTLETRHFYYNSLHVTDNEIQTMPWATILEKVVLLQRSQQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTMKSGSNGTQNRVILTKTLEWTLNWCILQSMFDRNFCVRGDFVSNPKTLQRRLMVVGFAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITNELLVLDAEGAMSMVVQHTHYLPKRWRGKESTESVCVEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILLFIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSAQGKQFLLNLRKFKEEKLPVHGNIHAASPPRMWRGISNMGSNIGDRNRFMSREMPYSTFLTGNHLGSLWLIEANQNNHPYLLDWYYTSRSYDVNQGDDPSEPFGVIESRELWIPPNITHNESRYEEYSNENRPGWAPFHLATSTSVPIFRESSIQDQSYNELTHTTSSHWWNRSHAQQGGQNQTSFFEPPDFNQERYNYSEKFSDRGSEDEDREQRLYSRDNHRLSRTYTDDLGAGEFNLHFDDIYSRPPETPPASF 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01842 1005 PANTHER APG9 AUTOPHAGY 9 152 954 IPR007241 GO:0006914
Phco2g01842 1005 Pfam Autophagy protein ATG9 211 705 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01842 Phco-Chr2 48986699 48995184 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01842 2 48986699 48995184 Phco2g01842 2 48986699 48995184 ECH
Phco2g01842 2 48986699 48995184 Phco6g01038 6 10327038 10332523 PCT