Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01034 ATGGGTAGCAACTTGCACCGACTGCTCAGAAGCTTCTGTTTGGGTACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACACCGGGCTCGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCTAATATTTGTGACTCTTCTGAAAATAAGAGCTGCCAGAATACATGGGAGCGGATTGGCAGTGCAGATTTTTCGCATGATCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGAATTGTTGGACAGGTAGCTGTTACAGGAAAACATCGGTGGATCTGTGTAGATAATCAAGTTACAAGCTCTGTTCCATCTTTTGAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTATAGCCGTAGTCCCCCTTGGAGTTGTTCAACTTGGTTCCTTAAATAAAGTTGCTGAAGATATGGGGGTTATAACATGTATCCGAAGTCTCTTTTTGTCTAATCAAGATTACACAATTTGCCATGCCCCTAATCAATTACAAAATAGTCTGAAGAATTCTTCCTCTGTGATGGATTCAAAAACTTCAGAGAGTGTGCCTGCTTACTTGCACACTACAGAGAAAACAATGAAGCATGAATCACTGGATAACATAATGCCCTTCCAATGTCCTGGGAACAATTATTCACCTCATGCTGTATATGAGAAAACGACTGTTGATGTGGCCAAGCATGAGGGGCCTGAATTAAACAGTGATGGAAGTTCCATTTTGCTTCAGTCAATGTCAAGTATGATGAATGTGGAGCAGCAGAAATTTTTAGGGATGAGACCTGTAAATGAGAGAAAGTTTGAAGGGAACAGTAGTGGCTGTGAAGATACAAGTGTGGAATCAAGAAAAAAATTGTCATCTTTTTTACACAATTTGGTTACGGATAATAATGGTGTCAATGATTTAGTATGTCCATCTGAAAATGTTGGAGTTAATTCTGTATCCTTCTCTTCAAACTTTCTTGATACAGTTGTTTGTGAGACTGAAAAGTTTCATCATGTAGATATCAACCAAAAAGGAGTGATGAACTGGTCCAGACCTTCAGATGCATACTCCCAAAAAGTTACTGGGAAGTCAAAGTTTCAGACTGAACTTTGTTCCAAGGATACCACATACACATTGAAGTTTCCTGCTGGCTATGAGTTACATGAAGCACTTGGGCCAAGTTTTCTAAAAGAGAGCAAATATTTTGATTGGGCAGTGAAGGCAAATCAAGATGTTAAAGCCACTGAGATATCAGATGAGATTAGCTGTAGCCAATTGACGTCTGAATCTCAGCCAGAGCATCTCTTGGAAGCTATGGTGGCTAACATAGGCCATAGTAATAATAATTTCAATAGCAAGTTGTCAGTTTCGACAACAATGCAGGCTGCAATAGCCTCAGGAGGTAATCCTGAGGGTTCCATTCACACTGTGCACACTATTAATTCTGAAAGCTGTTCAATAGATCAGCCTCATCTTGGTAGAGAGGAAAAACATTATAGTTTGAGTTCATCTGGGATATGTGGTATAATGTCCCCAAAGGGTTTTTCTTCTACATGTCCTAGTTCATGTAGTGAACAGTTTGAGAGGTCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGTGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTTATCCAAGATCGTATTAAGGAGTTGAGGGAACTGGTACCCAATGGAGCAAAGTGCAGTATTGATTCGCTACTGGAGTGCACCATAAAACACATGCTCTTTCTCAAGAATGTAACTAAGCATGCTGACAAGCTAAATAAATTTGGGGACACAAAGACGAAGTTGCATCACATTGAAAAAGACATTAACGGATCATCAAATTATCAACAAGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTCGTTCCATATTGGTGGAGAATCTTAATAAGAATGGCCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCAATCAGAAGCATGGGGCTGACAATATTGAATGGTGCAACAGAAGCTCATGGCGAGAAGACATGTATATGTTTTGTGGTTGAGGGAAGATCAGAAGGCCAGAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACAGTTTATTCATAA 2229 0.4065 MGSNLHRLLRSFCLGTDWKYAIFWKLKHRARMILTWEDAYYDNPNICDSSENKSCQNTWERIGSADFSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHRWICVDNQVTSSVPSFEFADGWQSQFSAGIRTIVVIAVVPLGVVQLGSLNKVAEDMGVITCIRSLFLSNQDYTICHAPNQLQNSLKNSSSVMDSKTSESVPAYLHTTEKTMKHESLDNIMPFQCPGNNYSPHAVYEKTTVDVAKHEGPELNSDGSSILLQSMSSMMNVEQQKFLGMRPVNERKFEGNSSGCEDTSVESRKKLSSFLHNLVTDNNGVNDLVCPSENVGVNSVSFSSNFLDTVVCETEKFHHVDINQKGVMNWSRPSDAYSQKVTGKSKFQTELCSKDTTYTLKFPAGYELHEALGPSFLKESKYFDWAVKANQDVKATEISDEISCSQLTSESQPEHLLEAMVANIGHSNNNFNSKLSVSTTMQAAIASGGNPEGSIHTVHTINSESCSIDQPHLGREEKHYSLSSSGICGIMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLKNVTKHADKLNKFGDTKTKLHHIEKDINGSSNYQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSMGLTILNGATEAHGEKTCICFVVEGRSEGQNNRNLHRLDILWPLVQLLQSKSTVYS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01034 742 MobiDBLite consensus disorder prediction 543 568 - -
Phco6g01034 742 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 553 602 IPR011598 GO:0046983
Phco6g01034 742 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Phco6g01034 742 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 739 IPR043561 GO:0003700|GO:0006355
Phco6g01034 742 MobiDBLite consensus disorder prediction 537 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01034 Phco-Chr6 10295040 10300446 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01034 6 10295040 10300446 Phco6g01034 6 10295040 10300446 ECH
Phco2g01838 2 48956217 48962266 Phco6g01034 6 10295040 10300446 PCT