Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01838 ATGGGTACTAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCGGATGATTATGACTCTTCAGAAAATAAGCACTGCCGGAATATCGTGGAACAGATTGGTTGTGGGAAATTTTCGCACAACGCATTAGGCTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGAAAATCAGGTTGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTGTTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTGTTCAGCTTGGCTCTCTTAATAAAGTGATTGAAGATACGGGGGTAGTAACTCATATTAGAAATCTCTTTTTGTCTACTCAAAATTACTCAATAGCCCAATGTCCCAGTCAAATACAGGGCAGTTTGAAGAGTTCTTTATCTCAGCTGGATATATTGAAGGAAAATTTGTCTTCAGATGTTATGCCATCTGGCTTTTACAATTCACAGAAATCTATGAAGAGTGAAACAGCTGATGTTTTAATGCCCCTTCAATGTTCTGGGAGGAACTATGCACCTCATTCTGCTTGTGTGAAAATGTCTGATGACGTGGCCAAGCAAGAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCAGGATTTTGAAGAGATGAAACCTCTCTATGGGAGGAAGGGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTTGTTACTGATAATGATTTAATATGTCCATCAGAAAAAGTCAGAATTGATTCTGCATACTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAATTGCATTACCAAAAAGGGGTGTTGAATTTCACCCAACCTTCAGATGTAAACTCGCAACATGTTGAAAAGTCAAAGTTTCGTTCTGAGCCTTCTTACAAGGATATGTCACATGTGTTAAATTTCCCTGCTGGCTGTGAGCTGCATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAATGTTTTGACTGGCCAGCACAGGTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGCCATAGTAATAATGATGTTAATAGTGAATTATCGTTTTGTCCATCAATGCAATCTGCAATGGCCTCTGGAAAAAACCATGAAGCTTCTACTCAAAATGTGTATGCTATTAATTCAGAAGGTTGTTCAATAGATCAGTTCTCTCTTGTAAAAGAGGACAAACACCATTCTTTGAGTTCATCATCAGGAATATGTGGTGTGATGTCCTCCAAAGCTGTTTCATCTACGTTCCCTAGTTCAAGTAGTGGACAACTTGAACGGTCGTCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGGCCTGGGGAAAGTTGTAGGCCTCGGCCAAGGGACAGGCAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGTTAGCTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAAGTAGGAGGTCATCTGAAAGTTCATTCAGTATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATTTTCTCGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAGGGTGGTACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACCGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCAAGGTGCATTCACAATAA 2202 0.4124 MGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCRNIVEQIGCGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICAENQVAGSGLSFEFADGWQSQFSAGIRTVAVVAVAPLGVVQLGSLNKVIEDTGVVTHIRNLFLSTQNYSIAQCPSQIQGSLKSSLSQLDILKENLSSDVMPSGFYNSQKSMKSETADVLMPLQCSGRNYAPHSACVKMSDDVAKQEGPELYSDESSILLQSISNMMNVEHQDFEEMKPLYGRKGEEGSSGCKDVRLESENNVSSFLSDFVTDNDLICPSEKVRIDSAYFPSAFLDTVVCETDKLHYQKGVLNFTQPSDVNSQHVEKSKFRSEPSYKDMSHVLNFPAGCELHEALGPSFLKGSKCFDWPAQVNQDMKTVEMSDEISQLTSESRPEHLLEAMVANICHSNNDVNSELSFCPSMQSAMASGKNHEASTQNVYAINSEGCSIDQFSLVKEDKHHSLSSSSGICGVMSSKAVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLADFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSVLVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSKVHSQ 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01838 733 MobiDBLite consensus disorder prediction 524 560 - -
Phco2g01838 733 MobiDBLite consensus disorder prediction 538 560 - -
Phco2g01838 733 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 732 IPR043561 GO:0003700|GO:0006355
Phco2g01838 733 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 560 601 IPR036638 GO:0046983
Phco2g01838 733 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 547 596 IPR011598 GO:0046983
Phco2g01838 733 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01838 Phco-Chr2 48956217 48962266 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01838 2 48956217 48962266 Phco2g01838 2 48956217 48962266 ECH
Phco2g01838 2 48956217 48962266 Phco6g01034 6 10295040 10300446 PCT