Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00999 ATGGCTGCACCTTCAATCTCAAACATGTTCATTTCCTTCAACAAACCGCACCAACTTACCTTCCCATTAGCCCACTCCAAATTCCAAACACCTTTCAGACGAACCCAGAACTCAATAAAAGTAGCCAGAGGTGAGAAGTCCTCAACCTCCACCGTGAGAGAGCAAGAGCAGGAGGAAGCAACAACGCTTCACACTCACACAAACAACTACAAACCCAAGGTAGAGGACCACCTGGACCGCCTCCCCGAAGCCTGGCGCCAAATCCAAGGTGAGAGCGACTGGGCCGGGCTTTTGGAGCCCATGGACCCTCTCTTGCGGATGGAAATGATCCGCTACGGCGACATGGCCCAGGCCTGCTACGACGCCTTCGACTTCGACCCCTTCTCCAAGTACTGCGGCAGCTGCAGGTTCACGCCCCGCAACTTCTTCTCCTCCCTCGAAATGCCCCTCGTCGGCTACACCGTCACGCGCTACCTCTACGCAACGGCCAACATCAACCTCCCCAACTTCTTCAAGCACTCACGCTGGTCTAAGATGTGGAGCAAGAACGCCAATTGGGCGGGGTACGTCGCCGTTTCTGACCACGCCATGACCACCCGTCTCGGCCGACGTGACATCACCATCGCCTGGCGCGGCACCGTCACCTGCCTCGAGTGGGTGGCGGACCTCATGGATTTCCTCAAACCAATCTCGTCAAACGGGATCCCGTGTCCCGATCAGACGGTGAAGGTAGAATCTGGGTTTCTAGAACTTTACACGGATAAAGAAGAGAGTTGCAGTTACTGCAAGTTCTCCGCGCGGGAACAGATTTTGACGGAGGTGAAGAGATTGCTGGAGATTTATAGCGACGAGGAAGTGAGCATTACAATCACTGGGCATAGTTTGGGGAGTGCGTTGGCGATTTTGAGCGCCTATGACATTGTGGAGACGGGAGTGAATACTATGAGGGATGGTAGGGGTGTGGGGGTTACGGTGATGTCGTTTTCCGGGCCGCGGGTGGGGAACGTGAGGTTTAAGGAGAGGTTGGAGAGGCTGGGGGTGAAGGTGTTGAGGGTGGTGAACAAGCATGACGTGGTGCCCAAGGCTCCCGGATTTTTGTTTAATGAGCAGTTGCCGGCGGCTGTGATGAAGGTGGCGGAGGGGCTGCCGTGGAGCTACTCGCATGTTGGGGTGGAGCTGGTGCTGGACCACAAGAAATCGCCGTTCCTGAATCCCAATGGTGATGCAGTATGTGCCCATAACTTGGAAGCTCTTTTGCATCTTCTGGACGGATACCATGGAAAGGGCGAAAGGTTCGTGCTAGCGAGTGGAAGAGATCCTGCTCTGGTGAACAAGGGATGTGACTTCCTGAAAGATCATCACATGATTCCACCAAACTGGAGACAAGATGCGAACAAGGGCATGATCAGGAGCAATGGACGGTGGATGCAGCCTGAACGACCAAAGCTTCAGGTTCACCCTCAAGATATGCATCACCATCTCACCCAACTCGGTCTCCCTTCTAGAATACATGAATATTAA 1521 0.5411 MAAPSISNMFISFNKPHQLTFPLAHSKFQTPFRRTQNSIKVARGEKSSTSTVREQEQEEATTLHTHTNNYKPKVEDHLDRLPEAWRQIQGESDWAGLLEPMDPLLRMEMIRYGDMAQACYDAFDFDPFSKYCGSCRFTPRNFFSSLEMPLVGYTVTRYLYATANINLPNFFKHSRWSKMWSKNANWAGYVAVSDHAMTTRLGRRDITIAWRGTVTCLEWVADLMDFLKPISSNGIPCPDQTVKVESGFLELYTDKEESCSYCKFSAREQILTEVKRLLEIYSDEEVSITITGHSLGSALAILSAYDIVETGVNTMRDGRGVGVTVMSFSGPRVGNVRFKERLERLGVKVLRVVNKHDVVPKAPGFLFNEQLPAAVMKVAEGLPWSYSHVGVELVLDHKKSPFLNPNGDAVCAHNLEALLHLLDGYHGKGERFVLASGRDPALVNKGCDFLKDHHMIPPNWRQDANKGMIRSNGRWMQPERPKLQVHPQDMHHHLTQLGLPSRIHEY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00999 506 CDD Lipase_3 141 397 - -
Phco6g00999 506 SUPERFAMILY alpha/beta-Hydrolases 172 425 IPR029058 -
Phco6g00999 506 MobiDBLite consensus disorder prediction 42 66 - -
Phco6g00999 506 Pfam Lipase (class 3) 208 365 IPR002921 GO:0006629
Phco6g00999 506 MobiDBLite consensus disorder prediction 47 61 - -
Phco6g00999 506 FunFam Phospholipase A1-II 3 84 487 - -
Phco6g00999 506 Gene3D alpha/beta hydrolase 84 490 IPR029058 -
Phco6g00999 506 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 30 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00999 Phco-Chr6 9818207 9823227 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01805 2 48577843 48580514 Phco6g00999 6 9818207 9823227 PCT