Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01805 ATGGCTTCGTCAATGGGAACCATGGTGGTGGCTTTGCCACAAACACAGAAGAACCAAGCTTACACCTTCCTATCCCAACTACCAAACACCCTAAAGAAACTAAAACCCAAATCCACCAAAAGTTTAAAAACTTACACGACCAACTTTACATGCAGTGCCACGCTTTCCTCTACTTTACAGAGCACTCAGAAGCAAGAAGAAGAGAAGAAACAAAAGCCACTAGCGGAGGTGTGGCGCAAGATCCACGGGGAGGACAACTGGGCCGGCCTTCTGGATCCCATGGATCCCGTAATGCGGGCAGAGCTGATCCACTACGGGGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTACGATCCCTACTCCAAATACTGCGGCAGCTGCAGGTTCGACATACCCGAATTCTTCCAATGCCTGGACATGCCCAACGTCGGATACAACATCACACGTTATCTCTACGCGACGGCCAACATCAACCTCCCTAGATTATTCCGCAAATCGCGGTGGCCCGACAAGAGGTGGAGCAAGCATGCGAACTGGGCAGGGTTCATCGCGGTGTCGGACGACGCCACGAGCAAGCGTCTGGGGCGGAGGGACATCACGATCGCATGGCGAGGGACAGTGACGAACGTGGAGTGGGTGGCCGACCTCACGAATTTCCTTAGACCGATCACTCCCCACATACCCTGTCCCGTGGAGGGTGTGAAGGTGGAGGCTGGTTTCTTGGATCTCTACACGGACAAGGAAACGGAGTGCGGGTTTTGTAAGTACTCGGCGAGGGAACAGGTTCTCGGGGAGGTGAGGCGGTTGATGAAGGTTTATGCGGACGAAGAGGTGAGTATTACGACGACGGGGCACAGTCTTGGGAGTGCGATGGCGATACTGAGTGCTTTCGATGTTGTGGAAAATGGGGTGAACGTGGGAAAGAATGGGAGAAAAGCGCATGTTTCGGTGTTTTCATTTTCGGGGCCGAGGGTGGGGAATGTGAGGTTCAAGGAGAGGTTGGAGGAGGAGCTGGGGATAAAGGTGCTGAGGGTGCTGAACAAGCATGACCTTGTGCCGCAGTCGCCGGGGTTGCTCTTCAACGAGGACTCGCCGCGGTGGTTGGTGAAGCTAGTGGAGTGGTTGCCCTGGTGTTATTTGCACGTTGGGGAGCAGTTGGAGTTGGATCACAAGAAATCACCTTTCTTGAACCCTGATGCGGATGTTGCCTGCGCCCATAACTTGGAGGCTCAGTTGCACTTGCTCGACGGATACCATGGAAAGAATGATGCATTTAAGAGAACGAGTTTGAGGGACATTGCTTTGGTGAACAAGGCTTGCGACTTCTTGAAGGACGAGCATTCGGTGCCACCATACTGGAGGCAAGACCTGAACAAGAACATGACCAAGACTGAACATGGACAGTGGGTGTTCAGTGAGCGTCCAATATCTCTAGATTCACACCATGATATTGATCCCCATCTCGGAGAAATAGGTCTCCGTTCTTCTGATCAATCAATCAATCAGCAGTGA 1515 0.5287 MASSMGTMVVALPQTQKNQAYTFLSQLPNTLKKLKPKSTKSLKTYTTNFTCSATLSSTLQSTQKQEEEKKQKPLAEVWRKIHGEDNWAGLLDPMDPVMRAELIHYGEMAQACYDAFDYDPYSKYCGSCRFDIPEFFQCLDMPNVGYNITRYLYATANINLPRLFRKSRWPDKRWSKHANWAGFIAVSDDATSKRLGRRDITIAWRGTVTNVEWVADLTNFLRPITPHIPCPVEGVKVEAGFLDLYTDKETECGFCKYSAREQVLGEVRRLMKVYADEEVSITTTGHSLGSAMAILSAFDVVENGVNVGKNGRKAHVSVFSFSGPRVGNVRFKERLEEELGIKVLRVLNKHDLVPQSPGLLFNEDSPRWLVKLVEWLPWCYLHVGEQLELDHKKSPFLNPDADVACAHNLEAQLHLLDGYHGKNDAFKRTSLRDIALVNKACDFLKDEHSVPPYWRQDLNKNMTKTEHGQWVFSERPISLDSHHDIDPHLGEIGLRSSDQSINQQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01805 504 SUPERFAMILY alpha/beta-Hydrolases 102 417 IPR029058 -
Phco2g01805 504 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 38 475 - -
Phco2g01805 504 FunFam Phospholipase A1-II 3 77 482 - -
Phco2g01805 504 Gene3D alpha/beta hydrolase 77 485 IPR029058 -
Phco2g01805 504 CDD Lipase_3 134 391 - -
Phco2g01805 504 Pfam Lipase (class 3) 202 359 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01805 Phco-Chr2 48577843 48580514 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01805 2 48577843 48580514 Phco6g00999 6 9818207 9823227 PCT