Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00971 ATGCTTTACAACAACGGAAGGAAGGGAAAAAGCAGAAGCTGCTCTTTTCTCTTGGTAGGTCTGCTCCTTTCCTTTGCCCCCAGTTTTCAAAGGACTTTCTTCACTGCAGAATCATGTAAAGAAGCACATCCTAATGCTTTAAATCCACAGTCCTGGCTCCAAGTTGAAAGAGGCAAGCTTCCCAAGTTGTCATCACAGTCCTCCTCTTCATCAATAGAATCTCTAATCAAGGTCCCACAGCCACCTATACTCCCATTTTTCAAGCCTGTTGATTATGTGAAAGTTTTAGCTCAAATTCACGAAGAACTAGAGCTCTGCTCTCCGCAGGAGCAGTCAAATCTGTTTTTGTTACAGTACCAGGTCTTTAGGGGCATGGGGGATGTTAAATTGATGCGGAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAAATAGTATTTGGGGCATGGCTGAAGTATGAGAAGCAAGGGGAAGAATTAGTTGCTCAGTTGCTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGAACCCATAGATGTAGAATCTCATATTTCTTTTGATAAAGTTATAATTTCCCAGGATAGTATTTCCATGAAGGGGAACCACACTTCACAATATGTAATCTTCACAATCGGAGATGAGAAGATAGTCTGTGATAGGCAAAAGATTTCCGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGGTGTTTCAGGGAATCGCTTTCTGAGACCATCGATTTGTCTGAAAACAACATCTCTCCTTCAGGTATGAGGGCAATAAGCTATTTTAGCTTGACGGGTAGTTTACTGGATGTCCCTCAAAATCTTTTGGTGGAGATATCAGTTTTTGCAAACAAGTATTGTTGCGAAAGACTAAAACTGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCATTGGAACTCATGGAATATGCTGTTGACCAGAATTCATCTGTCCTTGCGGCTTCATGTTTACAAGTTCTTTTACGCGATATACCCAATTGCTTGAGTGACAATCGGGTTGTGGAGTTATTTATTCATGCTAATAGGAATGAGTTGGAAGTCATGGTTGGGCCTGGTATATTTGCACTTTTTTGTTTCTTAAGCGAAGCTTCTATGAACCTTAGTTCTGCTTCAGACACAACAGCTCATTTCCTGGAACGGTTGGTTGATTTTGCTGAAAATGAAATGCAGAGACTTCTGGCATTTCATAAATTTGGATGTGTAAGGCTCTCGAGGAAAGAATATGATGAAGCCTATGGTCTTTTTGAGAGGGCTGCAAATGCAGGCCATATTTATTCCGTTGCAGGTTTAGCTAGACTGGACTCTATGAAGGGTGAGAAGCTTTTACCTTATCAGAAGATAAGCTCAGTCATTTCTTCTGGTACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGCGATTTGAGGTGGAAAGACCTTGAGAAAGCAACCGAAGTGGACCCGACTCTTGTATATCCCTACATGTATAGGTCTGCCACTTTAATGAGGACCGAGAATGTTCAAGGTGCATTGTCTGAAATCAACCGGATTCTTGGCTTTAAACTTCCATTGGAGTGCTTGGAACTACGGTTTTTCATCTATCTGGCCCTTGAGGACTACAAAGCAGCACTCCGAGATGTTCAAGCAATTCTTACCCTATGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACTGCAGATTGTTGGGCACGGTTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTTTCTGTCATCTACCAGATGCTTGAATCTGATGTGGCCAAAGGTGTTCTATACTTCAGACAGTCGTTGCTTCTCCTCAGGCTCAGCTGTCCTGAGGCTGCCATGAGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGAGTTGTGTATGAGGGGTGGATCTTGTACGATTCAGGACATTACGAGGAAGGGCTCCAAAAAGCAGAAGAGTCTATTACTATTAAAAGGTCTTTTGAGGCCTACTTCCTAAAAGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCTTGTTCTTCAACTGTCATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCGGATAATCTGCGCAAAGGTCAGGCTCTGAACAATCTTGGAAGTGTTTATGTTGATTGCGGGAAACTAGACGCAGCAGAAGATTGCTATATGAAGGCCCTTAAAATCCTGCACACGCGAGCCCATCAGGGTCTTGCACGTGTTCATTTTCTCAGAAATGATAAGGCTGCTGCTTTGAAGGAAATGAACAATCTTATTGAGAGGGCAAGAAACAATGCTTCAGCTTACGAGAAGAGGTCTGAGTATGGTGATCGTGAACTCACAAAGGCTGATCTGGAGATGGTCACTAGATTAGATCCTCTTCGGGTGTATCCTTACAGATATCGAGCAGCAGTTTTGATGGACAACCACAAGGAAGAGGAAGCCATTGCTGAACTCTCCAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACACAAGGGAGATGTCTTAAGTGCATTGAGAGATTGTCGTGCTGCACTCTCTGTGGACCCAAATCATCAGAAAATGTTGGAACTTCACTGTCGTGTTAATAGTCACGAGCCATGA 2751 0.4293 MLYNNGRKGKSRSCSFLLVGLLLSFAPSFQRTFFTAESCKEAHPNALNPQSWLQVERGKLPKLSSQSSSSSIESLIKVPQPPILPFFKPVDYVKVLAQIHEELELCSPQEQSNLFLLQYQVFRGMGDVKLMRRSLRSAWQRANTVHEKIVFGAWLKYEKQGEELVAQLLTACGKCEKEFEPIDVESHISFDKVIISQDSISMKGNHTSQYVIFTIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNISPSGMRAISYFSLTGSLLDVPQNLLVEISVFANKYCCERLKLACDRRLASLVSSREDALELMEYAVDQNSSVLAASCLQVLLRDIPNCLSDNRVVELFIHANRNELEVMVGPGIFALFCFLSEASMNLSSASDTTAHFLERLVDFAENEMQRLLAFHKFGCVRLSRKEYDEAYGLFERAANAGHIYSVAGLARLDSMKGEKLLPYQKISSVISSGTPLGWMYQERSLYCDGDLRWKDLEKATEVDPTLVYPYMYRSATLMRTENVQGALSEINRILGFKLPLECLELRFFIYLALEDYKAALRDVQAILTLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIESLSVIYQMLESDVAKGVLYFRQSLLLLRLSCPEAAMRSLQLAWQHASSEHERVVYEGWILYDSGHYEEGLQKAEESITIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDAAEDCYMKALKILHTRAHQGLARVHFLRNDKAAALKEMNNLIERARNNASAYEKRSEYGDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLSALRDCRAALSVDPNHQKMLELHCRVNSHEP 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00971 916 Gene3D Tetratricopeptide repeat domain 390 576 IPR011990 GO:0005515
Phco6g00971 916 SUPERFAMILY POZ domain 211 305 IPR011333 -
Phco6g00971 916 PANTHER ETO1-RELATED 30 915 IPR044631 GO:0010105
Phco6g00971 916 Gene3D Potassium Channel Kv1.1; Chain A 204 348 IPR011333 -
Phco6g00971 916 SMART tpr_5 539 572 IPR019734 GO:0005515
Phco6g00971 916 SMART tpr_5 410 443 IPR019734 GO:0005515
Phco6g00971 916 SMART tpr_5 868 901 IPR019734 GO:0005515
Phco6g00971 916 SMART tpr_5 739 772 IPR019734 GO:0005515
Phco6g00971 916 ProSiteProfiles TPR repeat profile. 739 772 IPR019734 GO:0005515
Phco6g00971 916 Pfam Tetratricopeptide repeat 740 768 IPR019734 GO:0005515
Phco6g00971 916 Gene3D Tetratricopeptide repeat domain 810 914 IPR011990 GO:0005515
Phco6g00971 916 SUPERFAMILY TPR-like 722 909 IPR011990 GO:0005515
Phco6g00971 916 SUPERFAMILY TPR-like 411 574 IPR011990 GO:0005515
Phco6g00971 916 Gene3D Tetratricopeptide repeat domain 628 801 IPR011990 GO:0005515
Phco6g00971 916 Coils Coil 780 811 - -
Phco6g00971 916 SUPERFAMILY TPR-like 542 768 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00971 Phco-Chr6 9480303 9484966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01778 2 48295160 48306819 Phco6g00971 6 9480303 9484966 PCT