Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00968 ATGGAACCCAAGTTCACAATGAATTGTGGCCGAAATGAGTTCCTCAAAACCAGAACTGGTACTCATTTGCCAGAAAGCCCAAGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCTATTGAGGTCTCTAAAGCTCTTGCACCTCCACCACCTCCTTCTTCTTACACACCTTCCAAGCCTCCTATTATACCCTCTCGTGTCACCAACTCCATTTCCGAAGAAACCTCTTCTGCTAAGTCAGAGGAATTCTCAGCAACCATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCCGCTACTTCACAGCTCGTCCTTGACCGCATTATGTCACAGTCAACTAGAGAGGAAGTGTCTCCATTAACGTCTGGTAGACTATCCCACAGCAGTGAACCTTTGAATGGTGGTGCTTCTTTAACCGGGACGGACAGTCCACCAATCTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTTTTTTCGGGCAAACAACTCCATTCACCCCTTATTCAATGGTGGGCGAGCCATGAGTGGTGCTACAGGCAATGCCACTCCTTGCTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAACTTCATGCTGCAATTTCTGTTGCTGCCTTAGCAGCTGCAGTTGCAGCTGTCACTGCCGCAACGGCAGGCACATCTGCAGCTACCAAGGATGAGAAGATGGCCATGTCTGTTGCTTCTGCGGCCACTTTAGTTGCTGCTCAGTGTGTAGAGGCCGCTGAAGCTATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGTCCGTTCTCATGATGATATCACAACACTTACAGCTGCAGCTGCCACAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGGTGTGGAATATTAATGCAGTGACTCCATTAGAGAGAGGAGCAGGTATTGGAATATGTGGTAAAAGCAACAACAGTAATTCTAGCACCAGTGATAGTGGGGAGATTATAAATGGTGACAATTTTTTGGGTTCCTGCAACCAAGAGCTCCTTGCTAGGGGCACTGCATTACTCAAACGGACCCGCAAAGGCGATCTTCACTGGAAAGTAGTTTCAGTTTATATACATCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACACGTTGCAGGAACTATTACCAAAAAGAAAAAGAATGTTGTGTTGGATGTGTGCGCAAATTTAGCAGCGTGGCCAGGACGGCATCTGTTTAATGAGGGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGGGGAGTTGTGGAGTTTGAATGTAGAAATCAAAGAGAATATGATATTTGGACCCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACCTAAATGGGATATCAAGTCTCCTTGTTGTTGCCAGGGCCACTGCTATGTTTTCAAAGGGCTTTGTAACGTTAACTGCTAAGGATTATAGACTATAG 1539 0.46 MEPKFTMNCGRNEFLKTRTGTHLPESPRVPMEFLSRSWSASAIEVSKALAPPPPPSSYTPSKPPIIPSRVTNSISEETSSAKSEEFSATMCGNQFSFASSATSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHAAISVAALAAAVAAVTAATAGTSAATKDEKMAMSVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNINAVTPLERGAGIGICGKSNNSNSSTSDSGEIINGDNFLGSCNQELLARGTALLKRTRKGDLHWKVVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCANLAAWPGRHLFNEGEERRYFGLKTEARGVVEFECRNQREYDIWTQGVSRLLSIVARRQNLNGISSLLVVARATAMFSKGFVTLTAKDYRL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00968 512 MobiDBLite consensus disorder prediction 116 151 - -
Phco6g00968 512 PANTHER EXPRESSED PROTEIN 19 477 IPR040269 -
Phco6g00968 512 Pfam Auxin canalisation 24 328 IPR008546 -
Phco6g00968 512 Pfam Plant pleckstrin homology-like region 372 476 IPR013666 -
Phco6g00968 512 MobiDBLite consensus disorder prediction 116 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00968 Phco-Chr6 9460341 9464361 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00968 6 9460341 9464361 Phco6g00968 6 9460341 9464361 ECH
Phco2g01776 2 48287219 48290573 Phco6g00968 6 9460341 9464361 PCT